EnhancerDB
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  3. vista967[chr1:28305616-28305920]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista967[chr1:28305616-28305920]
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Tissue distribution of vista967
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Transcription factor that possibly regulate vista967[chr1:28305616-28305920]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 28305628 28305633 SP1 TRANSFAC yes 27731030
chr1 28305628 28305633 SP1 TRANSFAC yes 118261030
chr1 28305650 28305670 ESR1 JASPAR yes 27731031
chr1 28305650 28305670 ESR1 JASPAR yes 118261031
chr1 28305656 28305660 ESR1 TRANSFAC yes 27731032
chr1 28305656 28305660 ESR1 TRANSFAC yes 118261032
chr1 28305664 28305680 POU4F3 JASPAR yes 27731033
chr1 28305664 28305680 POU4F3 JASPAR yes 118261033
chr1 28305671 28305685 POU4F1 JASPAR yes 27731034
chr1 28305671 28305685 POU4F1 JASPAR yes 118261034
chr1 28305674 28305686 PBX1 JASPAR yes 27731035
chr1 28305674 28305686 PBX1 JASPAR yes 118261035
chr1 28305684 28305698 E2F7 JASPAR yes 27731036
chr1 28305684 28305698 E2F7 JASPAR yes 118261036
chr1 28305685 28305697 E2F8 JASPAR yes 27731037
chr1 28305685 28305697 E2F8 JASPAR yes 118261037
chr1 28305708 28305722 SPI1 JASPAR yes 27731038
chr1 28305708 28305722 SPI1 JASPAR yes 118261038
chr1 28305708 28305723 STAT2 JASPAR yes 27731039
chr1 28305708 28305723 STAT2 JASPAR yes 118261039
chr1 28305710 28305731 IRF1 JASPAR yes 27731040
chr1 28305710 28305731 IRF1 JASPAR yes 118261040
chr1 28305715 28305727 IRF1 JASPAR yes 27731041
chr1 28305715 28305727 IRF1 JASPAR yes 118261041
chr1 28305716 28305731 FOXP1 JASPAR yes 27731042
chr1 28305716 28305731 FOXP1 JASPAR yes 118261042
chr1 28305717 28305728 FOXA1 JASPAR yes 27731043
chr1 28305717 28305728 FOXA1 JASPAR yes 118261043
chr1 28305719 28305730 FOXP2 JASPAR yes 27731044
chr1 28305719 28305730 FOXP2 JASPAR yes 118261044
chr1 28305720 28305728 FOXO3 JASPAR yes 27731045
chr1 28305720 28305728 FOXO3 JASPAR yes 118261045
chr1 28305723 28305729 HiNF-A TRANSFAC yes 27731046
chr1 28305723 28305729 HiNF-A TRANSFAC yes 118261046
chr1 28305737 28305742 H4TF1 TRANSFAC yes 27731047
chr1 28305737 28305742 H4TF1 TRANSFAC yes 118261047
chr1 28305753 28305768 FOXP1 JASPAR yes 27731048
chr1 28305753 28305768 FOXP1 JASPAR yes 118261048
chr1 28305754 28305775 IRF1 JASPAR yes 27731049
chr1 28305754 28305775 IRF1 JASPAR yes 118261049
chr1 28305756 28305759 MYB TRANSFAC yes 27731050
chr1 28305756 28305759 MYB TRANSFAC yes 118261050
chr1 28305756 28305768 FOXI1 JASPAR yes 27731051
chr1 28305756 28305768 FOXI1 JASPAR yes 118261051
chr1 28305771 28305775 YY1 TRANSFAC yes 27731052
chr1 28305771 28305775 YY1 TRANSFAC yes 118261052
chr1 28305772 28305783 E2F6 JASPAR yes 27731053
chr1 28305772 28305783 E2F6 JASPAR yes 118261053
chr1 28305772 28305786 E2F7 JASPAR yes 27731054
chr1 28305772 28305786 E2F7 JASPAR yes 118261054
chr1 28305773 28305785 E2F8 JASPAR yes 27731055
chr1 28305773 28305785 E2F8 JASPAR yes 118261055
chr1 28305773 28305794 ZNF263 JASPAR yes 27731056
chr1 28305773 28305794 ZNF263 JASPAR yes 118261056
chr1 28305780 28305784 H1TF2 TRANSFAC yes 27731057
chr1 28305780 28305784 NFE TRANSFAC yes 27731058
chr1 28305780 28305784 SRF TRANSFAC yes 27731059
chr1 28305780 28305784 H1TF2 TRANSFAC yes 118261057
chr1 28305780 28305784 NFE TRANSFAC yes 118261058
chr1 28305780 28305784 SRF TRANSFAC yes 118261059
chr1 28305789 28305793 YY1 TRANSFAC yes 27731060
chr1 28305789 28305793 YY1 TRANSFAC yes 118261060
chr1 28305789 28305804 STAT1 JASPAR yes 27731061
chr1 28305789 28305804 STAT1 JASPAR yes 118261061
chr1 28305791 28305802 STAT1 JASPAR yes 27731062
chr1 28305791 28305802 STAT3 JASPAR yes 27731063
chr1 28305791 28305802 STAT1 JASPAR yes 118261062
chr1 28305791 28305802 STAT3 JASPAR yes 118261063
chr1 28305842 28305857 MEF2C JASPAR yes 27731064
chr1 28305842 28305857 MEF2C JASPAR yes 118261064
chr1 28305851 28305870 REST JASPAR yes 27731065
chr1 28305851 28305870 REST JASPAR yes 118261065
chr1 28305863 28305878 NFYB JASPAR yes 27731066
chr1 28305863 28305878 NFYB JASPAR yes 118261066
chr1 28305870 28305874 H1TF2 TRANSFAC yes 27731067
chr1 28305870 28305874 NFE TRANSFAC yes 27731068
chr1 28305870 28305874 SRF TRANSFAC yes 27731069
chr1 28305870 28305874 H1TF2 TRANSFAC yes 118261067
chr1 28305870 28305874 NFE TRANSFAC yes 118261068
chr1 28305870 28305874 SRF TRANSFAC yes 118261069
chr1 28305870 28305880 HOXA13 JASPAR yes 27731070
chr1 28305870 28305880 HOXB13 JASPAR yes 27731071
chr1 28305870 28305880 HOXD13 JASPAR yes 27731072
chr1 28305870 28305880 HOXA13 JASPAR yes 118261070
chr1 28305870 28305880 HOXB13 JASPAR yes 118261071
chr1 28305870 28305880 HOXD13 JASPAR yes 118261072
chr1 28305887 28305897 MYF6 JASPAR yes 27731073
chr1 28305887 28305897 MYF6 JASPAR yes 118261073
chr1 28305889 28305893 YY1 TRANSFAC yes 27731074
chr1 28305889 28305893 YY1 TRANSFAC yes 118261074
chr1 28305898 28305913 HSF1 JASPAR yes 27731075
chr1 28305898 28305913 HSF1 JASPAR yes 118261075
chr1 28305899 28305912 HSF2 JASPAR yes 27731076
chr1 28305899 28305912 HSF2 JASPAR yes 118261076
chr1 28305912 28305919 NKX3-1 JASPAR yes 27731077
chr1 28305912 28305919 NKX3-1 JASPAR yes 118261077
SNP sites on vista967[chr1:28305616-28305920]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 28305636 rs111625560 C T no 189186
chr1 28305746 rs181347531 G A no 189187
chr1 28305824 rs186307081 C T no 189188
chr1 28305886 rs7543431 T G no 189189
Genes possibly regulated by vista967[chr1:28305616-28305920]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 28218035 28241257 - RPA2 ENSG00000117748.5 28241257 0.76 0.99 401 35641
chr1 28261504 28285668 + SMPDL3B ENSG00000130768.10 28261504 0.87 1.0 402 55888
chr1 28285973 28294607 + XKR8 ENSG00000158156.7 28285973 0.65 1.0 403 80357
Expression level of Genes
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miRNAs possibly regulated by vista967[chr1:28305616-28305920]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results