EnhancerDB
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  3. vista968[chr1:28318645-28318992]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista968[chr1:28318645-28318992]
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Tissue distribution of vista968
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Transcription factor that possibly regulate vista968[chr1:28318645-28318992]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 28318645 28318657 YY1 JASPAR yes 27732084
chr1 28318645 28318657 YY1 JASPAR yes 118261078
chr1 28318648 28318658 OLIG2 JASPAR yes 27732085
chr1 28318648 28318658 OLIG3 JASPAR yes 27732086
chr1 28318648 28318658 OLIG2 JASPAR yes 118261079
chr1 28318648 28318658 OLIG3 JASPAR yes 118261080
chr1 28318683 28318696 NR2F1 JASPAR yes 27732087
chr1 28318683 28318696 NR2F1 JASPAR yes 118261081
chr1 28318685 28318696 ESRRA JASPAR yes 27732088
chr1 28318685 28318696 ESRRB JASPAR yes 27732089
chr1 28318685 28318696 ESRRA JASPAR yes 118261082
chr1 28318685 28318696 ESRRB JASPAR yes 118261083
chr1 28318686 28318694 NR4A2 JASPAR yes 27732090
chr1 28318686 28318694 NR4A2 JASPAR yes 118261084
chr1 28318687 28318697 RORA JASPAR yes 27732091
chr1 28318687 28318697 RORA JASPAR yes 118261085
chr1 28318693 28318699 JUN TRANSFAC yes 27732092
chr1 28318693 28318699 JUN TRANSFAC yes 118261086
chr1 28318730 28318751 REST JASPAR yes 27732093
chr1 28318730 28318751 REST JASPAR yes 118261087
chr1 28318763 28318773 NFATC3 JASPAR yes 27732094
chr1 28318763 28318773 NFATC3 JASPAR yes 118261088
chr1 28318764 28318771 NFATC2 JASPAR yes 27732095
chr1 28318764 28318771 NFATC2 JASPAR yes 118261089
chr1 28318779 28318784 SP1 TRANSFAC yes 27732096
chr1 28318779 28318784 SP1 TRANSFAC yes 118261090
chr1 28318780 28318790 ZNF740 JASPAR yes 27732097
chr1 28318780 28318790 ZNF740 JASPAR yes 118261091
chr1 28318799 28318817 NR3C1 JASPAR yes 27732098
chr1 28318799 28318817 NR3C1 JASPAR yes 118261092
chr1 28318831 28318835 YY1 TRANSFAC yes 27732099
chr1 28318831 28318835 YY1 TRANSFAC yes 118261093
chr1 28318838 28318851 POU2F2 JASPAR yes 27732100
chr1 28318838 28318851 POU2F2 JASPAR yes 118261094
chr1 28318839 28318851 POU3F1 JASPAR yes 27732101
chr1 28318839 28318851 POU3F2 JASPAR yes 27732102
chr1 28318839 28318851 POU3F1 JASPAR yes 118261095
chr1 28318839 28318851 POU3F2 JASPAR yes 118261096
chr1 28318849 28318854 ETS2 TRANSFAC yes 27732103
chr1 28318849 28318854 ETS2 TRANSFAC yes 118261097
chr1 28318851 28318865 STAT1 JASPAR yes 27732104
chr1 28318851 28318865 STAT1 JASPAR yes 118261098
chr1 28318931 28318944 ELF1 JASPAR yes 27732105
chr1 28318931 28318944 ELF1 JASPAR yes 118261099
chr1 28318933 28318944 ETV2 JASPAR yes 27732106
chr1 28318933 28318944 ETV2 JASPAR yes 118261100
chr1 28318934 28318944 ELK1 JASPAR yes 27732107
chr1 28318934 28318944 ELK3 JASPAR yes 27732108
chr1 28318934 28318944 ERF JASPAR yes 27732109
chr1 28318934 28318944 ERG JASPAR yes 27732110
chr1 28318934 28318944 ETS1 JASPAR yes 27732111
chr1 28318934 28318944 ETV1 JASPAR yes 27732112
chr1 28318934 28318944 ETV3 JASPAR yes 27732113
chr1 28318934 28318944 ETV4 JASPAR yes 27732114
chr1 28318934 28318944 ETV6 JASPAR yes 27732115
chr1 28318934 28318944 FEV JASPAR yes 27732116
chr1 28318934 28318944 FLI1 JASPAR yes 27732117
chr1 28318934 28318944 GABPA JASPAR yes 27732118
chr1 28318934 28318944 ELK1 JASPAR yes 118261101
chr1 28318934 28318944 ELK3 JASPAR yes 118261102
chr1 28318934 28318944 ERF JASPAR yes 118261103
chr1 28318934 28318944 ERG JASPAR yes 118261104
chr1 28318934 28318944 ETS1 JASPAR yes 118261105
chr1 28318934 28318944 ETV1 JASPAR yes 118261106
chr1 28318934 28318944 ETV3 JASPAR yes 118261107
chr1 28318934 28318944 ETV4 JASPAR yes 118261108
chr1 28318934 28318944 ETV6 JASPAR yes 118261109
chr1 28318934 28318944 FEV JASPAR yes 118261110
chr1 28318934 28318944 FLI1 JASPAR yes 118261111
chr1 28318934 28318944 GABPA JASPAR yes 118261112
chr1 28318934 28318945 ELK4 JASPAR yes 27732119
chr1 28318934 28318945 FLI1 JASPAR yes 27732120
chr1 28318934 28318945 ELK4 JASPAR yes 118261113
chr1 28318934 28318945 FLI1 JASPAR yes 118261114
chr1 28318935 28318943 EHF JASPAR yes 27732121
chr1 28318935 28318943 FEV JASPAR yes 27732122
chr1 28318935 28318943 EHF JASPAR yes 118261115
chr1 28318935 28318943 FEV JASPAR yes 118261116
chr1 28318936 28318943 SPI1 JASPAR yes 27732123
chr1 28318936 28318943 SPI1 JASPAR yes 118261117
chr1 28318978 28318989 ELK4 JASPAR yes 27732124
chr1 28318978 28318989 FLI1 JASPAR yes 27732125
chr1 28318978 28318989 ELK4 JASPAR yes 118261118
chr1 28318978 28318989 FLI1 JASPAR yes 118261119
chr1 28318978 28318991 ELF3 JASPAR yes 27732126
chr1 28318978 28318991 ELF3 JASPAR yes 118261120
chr1 28318979 28318989 ERF JASPAR yes 27732127
chr1 28318979 28318989 ETS1 JASPAR yes 27732128
chr1 28318979 28318989 ETV6 JASPAR yes 27732129
chr1 28318979 28318989 GABPA JASPAR yes 27732130
chr1 28318979 28318989 ERF JASPAR yes 118261121
chr1 28318979 28318989 ETS1 JASPAR yes 118261122
chr1 28318979 28318989 ETV6 JASPAR yes 118261123
chr1 28318979 28318989 GABPA JASPAR yes 118261124
chr1 28318979 28318990 ELF5 JASPAR yes 27732131
chr1 28318979 28318990 ELF5 JASPAR yes 118261125
chr1 28318979 28318991 EHF JASPAR yes 27732132
chr1 28318979 28318991 ELF1 JASPAR yes 27732133
chr1 28318979 28318991 ELF4 JASPAR yes 27732134
chr1 28318979 28318991 EHF JASPAR yes 118261126
chr1 28318979 28318991 ELF1 JASPAR yes 118261127
chr1 28318979 28318991 ELF4 JASPAR yes 118261128
chr1 28318979 28318992 ELF1 JASPAR yes 27732135
chr1 28318979 28318992 ELF1 JASPAR yes 118261129
chr1 28318980 28318987 SPI1 JASPAR yes 27732136
chr1 28318980 28318987 SPI1 JASPAR yes 118261130
chr1 28318980 28318988 EHF JASPAR yes 27732137
chr1 28318980 28318988 FEV JASPAR yes 27732138
chr1 28318980 28318988 EHF JASPAR yes 118261131
chr1 28318980 28318988 FEV JASPAR yes 118261132
SNP sites on vista968[chr1:28318645-28318992]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 28318661 rs142115455 G A no 189261
chr1 28318742 rs151158116 G A
REST
189262
chr1 28318758 rs141372477 G A no 189263
chr1 28318791 rs111978488 A G no 189264
chr1 28318801 rs12033115 A G
NR3C1
189265
chr1 28318839 rs142292627 T C
POU2F2 POU3F1 POU3F2
189266
chr1 28318922 rs150160051 C T no 189267
Genes possibly regulated by vista968[chr1:28318645-28318992]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 28218035 28241257 - RPA2 ENSG00000117748.5 28241257 0.76 0.99 401 22612
chr1 28261504 28285668 + SMPDL3B ENSG00000130768.10 28261504 0.87 1.0 402 42859
chr1 28285973 28294607 + XKR8 ENSG00000158156.7 28285973 0.65 1.0 403 67328
chr1 28296855 28415207 - EYA3 ENSG00000158161.11 28415207 0.83 0.99 404 3785
Expression level of Genes
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miRNAs possibly regulated by vista968[chr1:28318645-28318992]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results