EnhancerDB
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  3. vista970[chr1:28389248-28389585]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista970[chr1:28389248-28389585]
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Tissue distribution of vista970
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Transcription factor that possibly regulate vista970[chr1:28389248-28389585]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 28389240 28389253 SMAD2 JASPAR yes 27735449
chr1 28389240 28389253 SMAD2 JASPAR yes 118261157
chr1 28389243 28389253 TBR1 JASPAR yes 27735450
chr1 28389243 28389253 TBR1 JASPAR yes 118261158
chr1 28389244 28389254 TBX21 JASPAR yes 27735451
chr1 28389244 28389254 TBX21 JASPAR yes 118261159
chr1 28389245 28389253 MGA JASPAR yes 27735452
chr1 28389245 28389253 TBX15 JASPAR yes 27735453
chr1 28389245 28389253 TBX1 JASPAR yes 27735454
chr1 28389245 28389253 TBX4 JASPAR yes 27735455
chr1 28389245 28389253 TBX5 JASPAR yes 27735456
chr1 28389245 28389253 MGA JASPAR yes 118261160
chr1 28389245 28389253 TBX15 JASPAR yes 118261161
chr1 28389245 28389253 TBX1 JASPAR yes 118261162
chr1 28389245 28389253 TBX4 JASPAR yes 118261163
chr1 28389245 28389253 TBX5 JASPAR yes 118261164
chr1 28389245 28389254 ZEB1 JASPAR yes 27735457
chr1 28389245 28389254 ZEB1 JASPAR yes 118261165
chr1 28389245 28389257 PKNOX1 JASPAR yes 27735458
chr1 28389245 28389257 TGIF1 JASPAR yes 27735459
chr1 28389245 28389257 PKNOX1 JASPAR yes 118261166
chr1 28389245 28389257 TGIF1 JASPAR yes 118261167
chr1 28389245 28389258 ZBTB18 JASPAR yes 27735460
chr1 28389245 28389258 ZBTB18 JASPAR yes 118261168
chr1 28389246 28389256 FIGLA JASPAR yes 27735461
chr1 28389246 28389256 ID4 JASPAR yes 27735462
chr1 28389246 28389256 TCF3 JASPAR yes 27735463
chr1 28389246 28389256 TCF4 JASPAR yes 27735464
chr1 28389246 28389256 FIGLA JASPAR yes 118261169
chr1 28389246 28389256 ID4 JASPAR yes 118261170
chr1 28389246 28389256 TCF3 JASPAR yes 118261171
chr1 28389246 28389256 TCF4 JASPAR yes 118261172
chr1 28389247 28389256 SNAI2 JASPAR yes 27735465
chr1 28389247 28389256 SNAI2 JASPAR yes 118261173
chr1 28389248 28389253 USF2 TRANSFAC yes 27735466
chr1 28389248 28389253 USF2 TRANSFAC yes 118261174
chr1 28389282 28389287 SP1 TRANSFAC yes 27735467
chr1 28389282 28389287 SP1 TRANSFAC yes 118261175
chr1 28389293 28389306 NR2F1 JASPAR yes 27735468
chr1 28389293 28389306 NR2F1 JASPAR yes 118261176
chr1 28389294 28389302 CREB1 JASPAR yes 27735469
chr1 28389294 28389302 CREB1 JASPAR yes 118261177
chr1 28389297 28389301 ESR1 TRANSFAC yes 27735470
chr1 28389297 28389301 ESR1 TRANSFAC yes 118261178
chr1 28389329 28389333 ESR1 TRANSFAC yes 27735471
chr1 28389329 28389333 ESR1 TRANSFAC yes 118261179
chr1 28389338 28389342 NFE TRANSFAC yes 27735472
chr1 28389338 28389342 NFE TRANSFAC yes 118261180
chr1 28389343 28389349 MYC TRANSFAC yes 27735473
chr1 28389343 28389349 MYC TRANSFAC yes 118261181
chr1 28389344 28389359 MEF2C JASPAR yes 27735474
chr1 28389344 28389359 MEF2C JASPAR yes 118261182
chr1 28389345 28389360 MEF2A JASPAR yes 27735475
chr1 28389345 28389360 MEF2A JASPAR yes 118261183
chr1 28389359 28389370 DUX4 JASPAR yes 27735476
chr1 28389359 28389370 DUX4 JASPAR yes 118261184
chr1 28389368 28389382 TLX1 JASPAR yes 27735477
chr1 28389368 28389382 TLX1 JASPAR yes 118261185
chr1 28389377 28389389 HES5 JASPAR yes 27735478
chr1 28389377 28389389 HES7 JASPAR yes 27735479
chr1 28389377 28389389 HES5 JASPAR yes 118261186
chr1 28389377 28389389 HES7 JASPAR yes 118261187
chr1 28389378 28389388 HEY1 JASPAR yes 27735480
chr1 28389378 28389388 HEY2 JASPAR yes 27735481
chr1 28389378 28389388 HEY1 JASPAR yes 118261188
chr1 28389378 28389388 HEY2 JASPAR yes 118261189
chr1 28389416 28389422 PEA3 TRANSFAC yes 27735482
chr1 28389416 28389422 PEA3 TRANSFAC yes 118261190
chr1 28389440 28389445 SP1 TRANSFAC yes 27735483
chr1 28389440 28389445 SP1 TRANSFAC yes 118261191
chr1 28389440 28389452 HINFP JASPAR yes 27735484
chr1 28389440 28389452 HINFP JASPAR yes 118261192
chr1 28389445 28389462 ESR1 JASPAR yes 27735485
chr1 28389445 28389462 ESR1 JASPAR yes 118261193
chr1 28389463 28389474 CEBPB JASPAR yes 27735486
chr1 28389463 28389474 CEBPB JASPAR yes 118261194
chr1 28389464 28389475 CEBPA JASPAR yes 27735487
chr1 28389464 28389475 CEBPA JASPAR yes 118261195
chr1 28389489 28389503 STAT1 JASPAR yes 27735488
chr1 28389489 28389503 STAT1 JASPAR yes 118261196
chr1 28389491 28389502 ETV2 JASPAR yes 27735489
chr1 28389491 28389502 ETV2 JASPAR yes 118261197
chr1 28389492 28389503 FLI1 JASPAR yes 27735490
chr1 28389492 28389503 FLI1 JASPAR yes 118261198
chr1 28389495 28389509 JUN JASPAR yes 27735491
chr1 28389495 28389509 JUN JASPAR yes 118261199
chr1 28389497 28389508 BATF JASPAR yes 27735492
chr1 28389497 28389508 BATF JASPAR yes 118261200
chr1 28389505 28389508 MYB TRANSFAC yes 27735493
chr1 28389505 28389508 MYB TRANSFAC yes 118261201
chr1 28389516 28389531 FOXP1 JASPAR yes 27735494
chr1 28389516 28389531 FOXP1 JASPAR yes 118261202
chr1 28389517 28389532 FOXP1 JASPAR yes 27735495
chr1 28389517 28389532 FOXP1 JASPAR yes 118261203
chr1 28389518 28389533 FOXP1 JASPAR yes 27735496
chr1 28389518 28389533 FOXP1 JASPAR yes 118261204
chr1 28389519 28389534 FOXP1 JASPAR yes 27735497
chr1 28389519 28389534 FOXP1 JASPAR yes 118261205
chr1 28389519 28389540 IRF1 JASPAR yes 27735498
chr1 28389519 28389540 IRF1 JASPAR yes 118261206
chr1 28389520 28389535 FOXP1 JASPAR yes 27735499
chr1 28389520 28389535 FOXP1 JASPAR yes 118261207
chr1 28389521 28389536 FOXP1 JASPAR yes 27735500
chr1 28389521 28389536 FOXP1 JASPAR yes 118261208
chr1 28389521 28389542 IRF1 JASPAR yes 27735501
chr1 28389521 28389542 IRF1 JASPAR yes 118261209
chr1 28389522 28389537 FOXP1 JASPAR yes 27735502
chr1 28389522 28389537 FOXP1 JASPAR yes 118261210
chr1 28389538 28389553 HNF4G JASPAR yes 27735503
chr1 28389538 28389553 HNF4G JASPAR yes 118261211
chr1 28389539 28389554 HNF4A JASPAR yes 27735504
chr1 28389539 28389554 HNF4A JASPAR yes 118261212
chr1 28389543 28389553 RORA JASPAR yes 27735505
chr1 28389543 28389553 RORA JASPAR yes 118261213
chr1 28389544 28389555 ESRRA JASPAR yes 27735506
chr1 28389544 28389555 ESRRB JASPAR yes 27735507
chr1 28389544 28389555 ESRRA JASPAR yes 118261214
chr1 28389544 28389555 ESRRB JASPAR yes 118261215
chr1 28389544 28389557 NR2F1 JASPAR yes 27735508
chr1 28389544 28389557 NR2F1 JASPAR yes 118261216
chr1 28389545 28389563 ESR2 JASPAR yes 27735509
chr1 28389545 28389563 NR3C1 JASPAR yes 27735510
chr1 28389545 28389563 ESR2 JASPAR yes 118261217
chr1 28389545 28389563 NR3C1 JASPAR yes 118261218
chr1 28389546 28389554 NR4A2 JASPAR yes 27735511
chr1 28389546 28389554 NR4A2 JASPAR yes 118261219
chr1 28389547 28389562 ESR2 JASPAR yes 27735512
chr1 28389547 28389562 ESR2 JASPAR yes 118261220
chr1 28389548 28389552 ESR1 TRANSFAC yes 27735513
chr1 28389548 28389552 ESR1 TRANSFAC yes 118261221
chr1 28389554 28389563 SRY JASPAR yes 27735514
chr1 28389554 28389563 SRY JASPAR yes 118261222
chr1 28389556 28389564 FOXO3 JASPAR yes 27735515
chr1 28389556 28389564 FOXO3 JASPAR yes 118261223
chr1 28389557 28389567 NFATC3 JASPAR yes 27735516
chr1 28389557 28389567 NFATC3 JASPAR yes 118261224
chr1 28389557 28389572 STAT1 JASPAR yes 27735517
chr1 28389557 28389572 STAT1 JASPAR yes 118261225
chr1 28389557 28389573 RFX2 JASPAR yes 27735518
chr1 28389557 28389573 RFX3 JASPAR yes 27735519
chr1 28389557 28389573 RFX4 JASPAR yes 27735520
chr1 28389557 28389573 RFX5 JASPAR yes 27735521
chr1 28389557 28389573 RFX2 JASPAR yes 118261226
chr1 28389557 28389573 RFX3 JASPAR yes 118261227
chr1 28389557 28389573 RFX4 JASPAR yes 118261228
chr1 28389557 28389573 RFX5 JASPAR yes 118261229
chr1 28389558 28389565 NFATC2 JASPAR yes 27735522
chr1 28389558 28389565 NFATC2 JASPAR yes 118261230
chr1 28389558 28389577 RFX2 JASPAR yes 27735523
chr1 28389558 28389577 RFX2 JASPAR yes 118261231
chr1 28389559 28389570 STAT1 JASPAR yes 27735524
chr1 28389559 28389570 STAT3 JASPAR yes 27735525
chr1 28389559 28389570 STAT1 JASPAR yes 118261232
chr1 28389559 28389570 STAT3 JASPAR yes 118261233
chr1 28389561 28389576 FOXP1 JASPAR yes 27735526
chr1 28389561 28389576 FOXP1 JASPAR yes 118261234
chr1 28389564 28389575 FOXP2 JASPAR yes 27735527
chr1 28389564 28389575 FOXP2 JASPAR yes 118261235
chr1 28389565 28389573 FOXO3 JASPAR yes 27735528
chr1 28389565 28389573 FOXO3 JASPAR yes 118261236
SNP sites on vista970[chr1:28389248-28389585]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 28389287 rs112894737 G A
SP1
189504
chr1 28389304 rs117666399 G A
NR2F1
189505
chr1 28389310 rs72658347 C G no 189506
chr1 28389385 rs139315208 C T
HES5 HES7 HEY1 HEY2
189507
chr1 28389499 rs147968910 AACTG A
BATF ETV2 FLI1 JUN STAT1
189508
chr1 28389499 rs551272155 AACTG A
BATF ETV2 FLI1 JUN STAT1
189509
Genes possibly regulated by vista970[chr1:28389248-28389585]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 28296855 28415207 - EYA3 ENSG00000158161.11 28415207 0.83 0.99 404 74378
Expression level of Genes
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miRNAs possibly regulated by vista970[chr1:28389248-28389585]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results