EnhancerDB
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  3. vista973[chr1:28431716-28431884]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista973[chr1:28431716-28431884]
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Tissue distribution of vista973
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Transcription factor that possibly regulate vista973[chr1:28431716-28431884]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 28431736 28431750 XBP1 JASPAR yes 27741076
chr1 28431736 28431750 XBP1 JASPAR yes 118261288
chr1 28431737 28431751 BATF3 JASPAR yes 27741077
chr1 28431737 28431751 BATF3 JASPAR yes 118261289
chr1 28431739 28431749 SREBF1 JASPAR yes 27741078
chr1 28431739 28431749 SREBF1 JASPAR yes 118261290
chr1 28431741 28431753 CREB1 JASPAR yes 27741079
chr1 28431741 28431753 CREB1 JASPAR yes 118261291
chr1 28431742 28431747 ATF1 TRANSFAC yes 27741080
chr1 28431742 28431747 ATF1 TRANSFAC yes 118261292
chr1 28431766 28431776 SP1 JASPAR yes 27741081
chr1 28431766 28431776 SP1 JASPAR yes 118261293
chr1 28431782 28431797 NFYB JASPAR yes 27741082
chr1 28431782 28431797 NFYB JASPAR yes 118261294
chr1 28431784 28431800 NFYA JASPAR yes 27741083
chr1 28431784 28431800 NFYA JASPAR yes 118261295
chr1 28431785 28431803 NFYA JASPAR yes 27741084
chr1 28431785 28431803 NFYA JASPAR yes 118261296
chr1 28431789 28431793 H1TF2 TRANSFAC yes 27741085
chr1 28431789 28431793 NFE TRANSFAC yes 27741086
chr1 28431789 28431793 SRF TRANSFAC yes 27741087
chr1 28431789 28431793 H1TF2 TRANSFAC yes 118261297
chr1 28431789 28431793 NFE TRANSFAC yes 118261298
chr1 28431789 28431793 SRF TRANSFAC yes 118261299
chr1 28431805 28431809 H1TF2 TRANSFAC yes 27741088
chr1 28431805 28431809 NFE TRANSFAC yes 27741089
chr1 28431805 28431809 SRF TRANSFAC yes 27741090
chr1 28431805 28431809 H1TF2 TRANSFAC yes 118261300
chr1 28431805 28431809 NFE TRANSFAC yes 118261301
chr1 28431805 28431809 SRF TRANSFAC yes 118261302
chr1 28431810 28431815 GATA2 JASPAR yes 27741091
chr1 28431810 28431815 GATA2 JASPAR yes 118261303
chr1 28431834 28431851 RXRA JASPAR yes 27741092
chr1 28431834 28431851 RXRA JASPAR yes 118261304
chr1 28431857 28431863 LEF1 TRANSFAC yes 27741093
chr1 28431857 28431863 SOX10 JASPAR yes 27741094
chr1 28431857 28431863 LEF1 TRANSFAC yes 118261305
chr1 28431857 28431863 SOX10 JASPAR yes 118261306
chr1 28431858 28431870 FOXC2 JASPAR yes 27741095
chr1 28431858 28431870 FOXC2 JASPAR yes 118261307
chr1 28431876 28431882 SOX10 JASPAR yes 27741096
chr1 28431876 28431882 SOX10 JASPAR yes 118261308
SNP sites on vista973[chr1:28431716-28431884]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 28431852 rs192327284 C G no 189984
Genes possibly regulated by vista973[chr1:28431716-28431884]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 28296855 28415207 - EYA3 ENSG00000158161.11 28415207 0.83 0.99 404 83491
chr1 28473677 28520447 - PTAFR ENSG00000169403.7 28520447 0.84 1.0 405 11437
chr1 28527013 28527152 - AL353354.1 ENSG00000215902.1 28527152 0.0 0.0 407 4732
chr1 28527070 28527419 + AL353354.2 ENSG00000269804.1 28527070 0.98 1.0 408 4814
Expression level of Genes
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miRNAs possibly regulated by vista973[chr1:28431716-28431884]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results