EnhancerDB
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  3. vista974[chr1:28433172-28433306]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista974[chr1:28433172-28433306]
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Tissue distribution of vista974
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Transcription factor that possibly regulate vista974[chr1:28433172-28433306]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 28433176 28433187 NFKB1 JASPAR yes 27741282
chr1 28433176 28433187 NFKB1 JASPAR yes 118261309
chr1 28433177 28433187 RELA JASPAR yes 27741283
chr1 28433177 28433187 REL JASPAR yes 27741284
chr1 28433177 28433187 RELA JASPAR yes 118261310
chr1 28433177 28433187 REL JASPAR yes 118261311
chr1 28433184 28433194 MAX JASPAR yes 27741285
chr1 28433184 28433194 MAX JASPAR yes 118261312
chr1 28433207 28433219 PBX1 JASPAR yes 27741286
chr1 28433207 28433219 PBX1 JASPAR yes 118261313
chr1 28433208 28433223 JUND JASPAR yes 27741287
chr1 28433208 28433223 JUND JASPAR yes 118261314
chr1 28433209 28433222 JUN JASPAR yes 27741288
chr1 28433209 28433222 JUN JASPAR yes 118261315
chr1 28433211 28433223 JDP2 JASPAR yes 27741289
chr1 28433211 28433223 JDP2 JASPAR yes 118261316
chr1 28433214 28433229 IRF9 JASPAR yes 27741290
chr1 28433214 28433229 IRF9 JASPAR yes 118261317
chr1 28433218 28433233 STAT2 JASPAR yes 27741291
chr1 28433218 28433233 STAT2 JASPAR yes 118261318
chr1 28433219 28433233 STAT1 JASPAR yes 27741292
chr1 28433219 28433233 STAT1 JASPAR yes 118261319
chr1 28433223 28433228 ETS2 TRANSFAC yes 27741293
chr1 28433223 28433228 ETS2 TRANSFAC yes 118261320
chr1 28433225 28433236 E2F6 JASPAR yes 27741294
chr1 28433225 28433236 E2F6 JASPAR yes 118261321
chr1 28433235 28433253 NFYA JASPAR yes 27741295
chr1 28433235 28433253 NFYA JASPAR yes 118261322
chr1 28433260 28433266 NFIC JASPAR yes 27741296
chr1 28433260 28433266 NFIC JASPAR yes 118261323
chr1 28433283 28433287 H4TF2 TRANSFAC yes 27741297
chr1 28433283 28433287 H4TF2 TRANSFAC yes 118261324
chr1 28433294 28433305 FLI1 JASPAR yes 27741298
chr1 28433294 28433305 FLI1 JASPAR yes 118261325
chr1 28433295 28433300 ETS2 TRANSFAC yes 27741299
chr1 28433295 28433300 ETS2 TRANSFAC yes 118261326
chr1 28433295 28433303 FEV JASPAR yes 27741300
chr1 28433295 28433303 FEV JASPAR yes 118261327
chr1 28433296 28433303 SPI1 JASPAR yes 27741301
chr1 28433296 28433303 SPI1 JASPAR yes 118261328
SNP sites on vista974[chr1:28433172-28433306]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 28433285 rs149031403 G T
H4TF2
190004
chr1 28433304 rs11247753 G A
FLI1
190005
Genes possibly regulated by vista974[chr1:28433172-28433306]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 28296855 28415207 - EYA3 ENSG00000158161.11 28415207 0.83 0.99 404 82035
chr1 28473677 28520447 - PTAFR ENSG00000169403.7 28520447 0.84 1.0 405 12859
chr1 28527013 28527152 - AL353354.1 ENSG00000215902.1 28527152 0.0 0.0 407 6154
chr1 28527070 28527419 + AL353354.2 ENSG00000269804.1 28527070 0.98 1.0 408 6236
Expression level of Genes
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miRNAs possibly regulated by vista974[chr1:28433172-28433306]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results