EnhancerDB
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  3. vista976[chr1:28437098-28437429]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista976[chr1:28437098-28437429]
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Tissue distribution of vista976
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Transcription factor that possibly regulate vista976[chr1:28437098-28437429]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 28437111 28437132 REST JASPAR yes 27741679
chr1 28437111 28437132 REST JASPAR yes 118261366
chr1 28437148 28437169 IRF1 JASPAR yes 27741680
chr1 28437148 28437169 IRF1 JASPAR yes 118261367
chr1 28437152 28437164 IRF1 JASPAR yes 27741681
chr1 28437152 28437164 IRF1 JASPAR yes 118261368
chr1 28437185 28437189 ESR1 TRANSFAC yes 27741682
chr1 28437185 28437189 ESR1 TRANSFAC yes 118261369
chr1 28437185 28437196 USF1 JASPAR yes 27741683
chr1 28437185 28437196 USF1 JASPAR yes 118261370
chr1 28437186 28437196 TFEB JASPAR yes 27741684
chr1 28437186 28437196 TFEC JASPAR yes 27741685
chr1 28437186 28437196 TFEB JASPAR yes 118261371
chr1 28437186 28437196 TFEC JASPAR yes 118261372
chr1 28437193 28437199 YY1 JASPAR yes 27741686
chr1 28437193 28437199 YY1 JASPAR yes 118261373
chr1 28437198 28437204 NFE2 TRANSFAC yes 27741687
chr1 28437198 28437204 NFE2 TRANSFAC yes 118261374
chr1 28437202 28437217 TFAP2C JASPAR yes 27741688
chr1 28437202 28437217 TFAP2C JASPAR yes 118261375
chr1 28437229 28437243 SPI1 JASPAR yes 27741689
chr1 28437229 28437243 SPIC JASPAR yes 27741690
chr1 28437229 28437243 SPI1 JASPAR yes 118261376
chr1 28437229 28437243 SPIC JASPAR yes 118261377
chr1 28437230 28437243 ELF1 JASPAR yes 27741691
chr1 28437230 28437243 ELF1 JASPAR yes 118261378
chr1 28437232 28437243 ELF5 JASPAR yes 27741692
chr1 28437232 28437243 ELF5 JASPAR yes 118261379
chr1 28437246 28437256 MZF1 JASPAR yes 27741693
chr1 28437246 28437256 MZF1 JASPAR yes 118261380
chr1 28437250 28437261 NFKB1 JASPAR yes 27741694
chr1 28437250 28437261 NFKB1 JASPAR yes 118261381
chr1 28437251 28437261 REL JASPAR yes 27741695
chr1 28437251 28437261 REL JASPAR yes 118261382
chr1 28437265 28437278 SMAD2 JASPAR yes 27741696
chr1 28437265 28437278 SMAD2 JASPAR yes 118261383
chr1 28437269 28437276 JUN TRANSFAC yes 27741697
chr1 28437269 28437276 JUN TRANSFAC yes 118261384
chr1 28437275 28437285 HMBOX1 JASPAR yes 27741698
chr1 28437275 28437285 HMBOX1 JASPAR yes 118261385
chr1 28437279 28437294 FOXP1 JASPAR yes 27741699
chr1 28437279 28437294 FOXP1 JASPAR yes 118261386
chr1 28437280 28437291 FOXA1 JASPAR yes 27741700
chr1 28437280 28437291 FOXA1 JASPAR yes 118261387
chr1 28437281 28437293 FOXC2 JASPAR yes 27741701
chr1 28437281 28437293 FOXC2 JASPAR yes 118261388
chr1 28437282 28437293 FOXP2 JASPAR yes 27741702
chr1 28437282 28437293 FOXP2 JASPAR yes 118261389
chr1 28437282 28437296 IRF7 JASPAR yes 27741703
chr1 28437282 28437296 IRF7 JASPAR yes 118261390
chr1 28437283 28437291 FOXO3 JASPAR yes 27741704
chr1 28437283 28437291 FOXO3 JASPAR yes 118261391
chr1 28437283 28437298 STAT2 JASPAR yes 27741705
chr1 28437283 28437298 STAT2 JASPAR yes 118261392
chr1 28437283 28437301 IRF2 JASPAR yes 27741706
chr1 28437283 28437301 IRF2 JASPAR yes 118261393
chr1 28437284 28437293 SRY JASPAR yes 27741707
chr1 28437284 28437293 SRY JASPAR yes 118261394
chr1 28437284 28437296 IRF1 JASPAR yes 27741708
chr1 28437284 28437296 IRF1 JASPAR yes 118261395
chr1 28437294 28437309 STAT1 JASPAR yes 27741709
chr1 28437294 28437309 STAT1 JASPAR yes 118261396
chr1 28437296 28437307 STAT1 JASPAR yes 27741710
chr1 28437296 28437307 STAT3 JASPAR yes 27741711
chr1 28437296 28437307 STAT1 JASPAR yes 118261397
chr1 28437296 28437307 STAT3 JASPAR yes 118261398
chr1 28437309 28437315 SP1 TRANSFAC yes 27741712
chr1 28437309 28437315 SP1 TRANSFAC yes 118261399
chr1 28437318 28437325 SPI1 JASPAR yes 27741713
chr1 28437318 28437325 SPI1 JASPAR yes 118261400
chr1 28437318 28437326 FEV JASPAR yes 27741714
chr1 28437318 28437326 FEV JASPAR yes 118261401
chr1 28437320 28437325 ETS2 TRANSFAC yes 27741715
chr1 28437320 28437325 ETS2 TRANSFAC yes 118261402
chr1 28437325 28437328 MYB TRANSFAC yes 27741716
chr1 28437325 28437328 MYB TRANSFAC yes 118261403
chr1 28437326 28437341 SOX21 JASPAR yes 27741717
chr1 28437326 28437341 SOX21 JASPAR yes 118261404
chr1 28437326 28437344 NFYA JASPAR yes 27741718
chr1 28437326 28437344 NFYA JASPAR yes 118261405
chr1 28437329 28437345 NFYA JASPAR yes 27741719
chr1 28437329 28437345 NFYA JASPAR yes 118261406
chr1 28437332 28437347 NFYB JASPAR yes 27741720
chr1 28437332 28437347 NFYB JASPAR yes 118261407
chr1 28437335 28437349 JUN JASPAR yes 27741721
chr1 28437335 28437349 JUN JASPAR yes 118261408
chr1 28437337 28437348 BATF JASPAR yes 27741722
chr1 28437337 28437348 BATF JASPAR yes 118261409
chr1 28437338 28437349 FOSL2 JASPAR yes 27741723
chr1 28437338 28437349 JUNB JASPAR yes 27741724
chr1 28437338 28437349 NFE2L2 JASPAR yes 27741725
chr1 28437338 28437349 FOSL2 JASPAR yes 118261410
chr1 28437338 28437349 JUNB JASPAR yes 118261411
chr1 28437338 28437349 NFE2L2 JASPAR yes 118261412
chr1 28437339 28437350 FOS JASPAR yes 27741726
chr1 28437339 28437350 FOSL1 JASPAR yes 27741727
chr1 28437339 28437350 JUND JASPAR yes 27741728
chr1 28437339 28437350 NFE2 JASPAR yes 27741729
chr1 28437339 28437350 FOS JASPAR yes 118261413
chr1 28437339 28437350 FOSL1 JASPAR yes 118261414
chr1 28437339 28437350 JUND JASPAR yes 118261415
chr1 28437339 28437350 NFE2 JASPAR yes 118261416
chr1 28437340 28437349 JDP2 JASPAR yes 27741730
chr1 28437340 28437349 JDP2 JASPAR yes 118261417
chr1 28437340 28437351 FOSL2 JASPAR yes 27741731
chr1 28437340 28437351 JUNB JASPAR yes 27741732
chr1 28437340 28437351 FOSL2 JASPAR yes 118261418
chr1 28437340 28437351 JUNB JASPAR yes 118261419
chr1 28437340 28437354 JUN JASPAR yes 27741733
chr1 28437340 28437354 JUN JASPAR yes 118261420
chr1 28437341 28437352 BATF JASPAR yes 27741734
chr1 28437341 28437352 BATF JASPAR yes 118261421
chr1 28437350 28437360 RELA JASPAR yes 27741735
chr1 28437350 28437360 REL JASPAR yes 27741736
chr1 28437350 28437360 RELA JASPAR yes 118261422
chr1 28437350 28437360 REL JASPAR yes 118261423
chr1 28437350 28437361 NFKB1 JASPAR yes 27741737
chr1 28437350 28437361 NFKB1 JASPAR yes 118261424
chr1 28437351 28437361 NFKB1 JASPAR yes 27741738
chr1 28437351 28437361 NFKB1 JASPAR yes 118261425
chr1 28437377 28437390 HSF4 JASPAR yes 27741739
chr1 28437377 28437390 HSF4 JASPAR yes 118261426
chr1 28437397 28437409 HNF1B JASPAR yes 27741740
chr1 28437397 28437409 HNF1B JASPAR yes 118261427
chr1 28437399 28437411 PBX1 JASPAR yes 27741741
chr1 28437399 28437411 PBX1 JASPAR yes 118261428
chr1 28437401 28437411 CUX2 JASPAR yes 27741742
chr1 28437401 28437411 CUX2 JASPAR yes 118261429
chr1 28437410 28437428 NR3C1 JASPAR yes 27741743
chr1 28437410 28437428 NR3C1 JASPAR yes 118261430
SNP sites on vista976[chr1:28437098-28437429]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 28437120 rs72875068 C T
REST
190037
chr1 28437233 rs547188183 A G
ELF1 ELF5 SPI1 SPIC
190038
chr1 28437409 rs148759971 T C
CUX2 HNF1B PBX1
190039
Genes possibly regulated by vista976[chr1:28437098-28437429]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 28296855 28415207 - EYA3 ENSG00000158161.11 28415207 0.83 0.99 404 78109
chr1 28473677 28520447 - PTAFR ENSG00000169403.7 28520447 0.84 1.0 405 16982
chr1 28527013 28527152 - AL353354.1 ENSG00000215902.1 28527152 0.0 0.0 407 10277
chr1 28527070 28527419 + AL353354.2 ENSG00000269804.1 28527070 0.98 1.0 408 10359
Expression level of Genes
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miRNAs possibly regulated by vista976[chr1:28437098-28437429]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results