EnhancerDB
  1. Home
  2. Enhancers
  3. vista979[chr1:28440576-28440976]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista979[chr1:28440576-28440976]
Back to top
Tissue distribution of vista979
Back to top
Transcription factor that possibly regulate vista979[chr1:28440576-28440976]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 28440569 28440580 FOSL2 JASPAR yes 27742266
chr1 28440569 28440580 FOSL2 JASPAR yes 118261642
chr1 28440571 28440584 SMAD2 JASPAR yes 27742267
chr1 28440571 28440584 SMAD2 JASPAR yes 118261643
chr1 28440574 28440584 TBR1 JASPAR yes 27742268
chr1 28440574 28440584 TBR1 JASPAR yes 118261644
chr1 28440575 28440585 TBX21 JASPAR yes 27742269
chr1 28440575 28440585 TBX21 JASPAR yes 118261645
chr1 28440576 28440584 MGA JASPAR yes 27742270
chr1 28440576 28440584 TBX15 JASPAR yes 27742271
chr1 28440576 28440584 TBX1 JASPAR yes 27742272
chr1 28440576 28440584 TBX4 JASPAR yes 27742273
chr1 28440576 28440584 TBX5 JASPAR yes 27742274
chr1 28440576 28440584 MGA JASPAR yes 118261646
chr1 28440576 28440584 TBX15 JASPAR yes 118261647
chr1 28440576 28440584 TBX1 JASPAR yes 118261648
chr1 28440576 28440584 TBX4 JASPAR yes 118261649
chr1 28440576 28440584 TBX5 JASPAR yes 118261650
chr1 28440576 28440585 ZEB1 JASPAR yes 27742275
chr1 28440576 28440585 ZEB1 JASPAR yes 118261651
chr1 28440576 28440588 PKNOX1 JASPAR yes 27742276
chr1 28440576 28440588 TGIF1 JASPAR yes 27742277
chr1 28440576 28440588 PKNOX1 JASPAR yes 118261652
chr1 28440576 28440588 TGIF1 JASPAR yes 118261653
chr1 28440576 28440589 ZBTB18 JASPAR yes 27742278
chr1 28440576 28440589 ZBTB18 JASPAR yes 118261654
chr1 28440577 28440587 FIGLA JASPAR yes 27742279
chr1 28440577 28440587 ID4 JASPAR yes 27742280
chr1 28440577 28440587 TCF3 JASPAR yes 27742281
chr1 28440577 28440587 TCF4 JASPAR yes 27742282
chr1 28440577 28440587 FIGLA JASPAR yes 118261655
chr1 28440577 28440587 ID4 JASPAR yes 118261656
chr1 28440577 28440587 TCF3 JASPAR yes 118261657
chr1 28440577 28440587 TCF4 JASPAR yes 118261658
chr1 28440578 28440587 SNAI2 JASPAR yes 27742283
chr1 28440578 28440587 SNAI2 JASPAR yes 118261659
chr1 28440579 28440584 USF2 TRANSFAC yes 27742284
chr1 28440579 28440584 USF2 TRANSFAC yes 118261660
chr1 28440585 28440606 LUN1 TRANSFAC yes 27742285
chr1 28440585 28440606 LUN1 TRANSFAC yes 118261661
chr1 28440613 28440626 NFKB1 JASPAR yes 27742286
chr1 28440613 28440626 NFKB1 JASPAR yes 118261662
chr1 28440615 28440621 ZNF354C JASPAR yes 27742287
chr1 28440615 28440621 ZNF354C JASPAR yes 118261663
chr1 28440618 28440629 USF1 JASPAR yes 27742288
chr1 28440618 28440629 USF2 JASPAR yes 27742289
chr1 28440618 28440629 USF1 JASPAR yes 118261664
chr1 28440618 28440629 USF2 JASPAR yes 118261665
chr1 28440619 28440629 SREBF2 JASPAR yes 27742290
chr1 28440619 28440629 SREBF2 JASPAR yes 118261666
chr1 28440621 28440626 USF2 TRANSFAC yes 27742291
chr1 28440621 28440626 USF2 TRANSFAC yes 118261667
chr1 28440624 28440637 NR2F1 JASPAR yes 27742292
chr1 28440624 28440637 NR2F1 JASPAR yes 118261668
chr1 28440625 28440633 CREB1 JASPAR yes 27742293
chr1 28440625 28440633 CREB1 JASPAR yes 118261669
chr1 28440626 28440644 RARA JASPAR yes 27742294
chr1 28440626 28440644 RARA JASPAR yes 118261670
chr1 28440628 28440632 ESR1 TRANSFAC yes 27742295
chr1 28440628 28440632 ESR1 TRANSFAC yes 118261671
chr1 28440655 28440668 JUN JASPAR yes 27742296
chr1 28440655 28440668 JUN JASPAR yes 118261672
chr1 28440655 28440669 SPIC JASPAR yes 27742297
chr1 28440655 28440669 SPIC JASPAR yes 118261673
chr1 28440660 28440668 FEV JASPAR yes 27742298
chr1 28440660 28440668 FEV JASPAR yes 118261674
chr1 28440661 28440672 NFKB1 JASPAR yes 27742299
chr1 28440661 28440672 NFKB1 JASPAR yes 118261675
chr1 28440662 28440672 RELA JASPAR yes 27742300
chr1 28440662 28440672 REL JASPAR yes 27742301
chr1 28440662 28440672 RELA JASPAR yes 118261676
chr1 28440662 28440672 REL JASPAR yes 118261677
chr1 28440675 28440690 MEF2C JASPAR yes 27742302
chr1 28440675 28440690 MEF2C JASPAR yes 118261678
chr1 28440676 28440691 MEF2A JASPAR yes 27742303
chr1 28440676 28440691 MEF2A JASPAR yes 118261679
chr1 28440677 28440689 MEF2A JASPAR yes 27742304
chr1 28440677 28440689 MEF2B JASPAR yes 27742305
chr1 28440677 28440689 MEF2D JASPAR yes 27742306
chr1 28440677 28440689 MEF2A JASPAR yes 118261680
chr1 28440677 28440689 MEF2B JASPAR yes 118261681
chr1 28440677 28440689 MEF2D JASPAR yes 118261682
chr1 28440698 28440708 SP1 JASPAR yes 27742307
chr1 28440698 28440708 SP1 JASPAR yes 118261683
chr1 28440708 28440713 SP1 TRANSFAC yes 27742308
chr1 28440708 28440713 SP1 TRANSFAC yes 118261684
chr1 28440775 28440792 ESR1 JASPAR yes 27742309
chr1 28440775 28440792 ESR1 JASPAR yes 118261685
chr1 28440775 28440793 ESR2 JASPAR yes 27742310
chr1 28440775 28440793 ESR2 JASPAR yes 118261686
chr1 28440779 28440793 TLX1 JASPAR yes 27742311
chr1 28440779 28440793 TLX1 JASPAR yes 118261687
chr1 28440780 28440797 PAX9 JASPAR yes 27742312
chr1 28440780 28440797 PAX9 JASPAR yes 118261688
chr1 28440815 28440835 PPARG JASPAR yes 27742313
chr1 28440815 28440835 PPARG JASPAR yes 118261689
chr1 28440817 28440821 LFA1 TRANSFAC yes 27742314
chr1 28440817 28440821 LFA1 TRANSFAC yes 118261690
chr1 28440831 28440835 NFE TRANSFAC yes 27742315
chr1 28440831 28440835 NFE TRANSFAC yes 118261691
chr1 28440832 28440847 MEF2C JASPAR yes 27742316
chr1 28440832 28440847 MEF2C JASPAR yes 118261692
chr1 28440835 28440850 FOXP1 JASPAR yes 27742317
chr1 28440835 28440850 FOXP1 JASPAR yes 118261693
chr1 28440836 28440842 TBP TRANSFAC yes 27742318
chr1 28440836 28440842 TBP TRANSFAC yes 118261694
chr1 28440836 28440851 FOXP1 JASPAR yes 27742319
chr1 28440836 28440851 FOXP1 JASPAR yes 118261695
chr1 28440837 28440852 FOXP1 JASPAR yes 27742320
chr1 28440837 28440852 FOXP1 JASPAR yes 118261696
chr1 28440837 28440858 IRF1 JASPAR yes 27742321
chr1 28440837 28440858 IRF1 JASPAR yes 118261697
chr1 28440838 28440853 FOXP1 JASPAR yes 27742322
chr1 28440838 28440853 FOXP1 JASPAR yes 118261698
chr1 28440840 28440855 FOXP1 JASPAR yes 27742323
chr1 28440840 28440855 FOXP1 JASPAR yes 118261699
chr1 28440841 28440862 IRF1 JASPAR yes 27742324
chr1 28440841 28440862 IRF1 JASPAR yes 118261700
chr1 28440865 28440870 TFAP2A TRANSFAC yes 27742325
chr1 28440865 28440870 TFAP2A TRANSFAC yes 118261701
chr1 28440865 28440871 MZF1 JASPAR yes 27742326
chr1 28440865 28440871 MZF1 JASPAR yes 118261702
chr1 28440880 28440886 SOX10 JASPAR yes 27742327
chr1 28440880 28440886 SOX10 JASPAR yes 118261703
chr1 28440924 28440932 FEV JASPAR yes 27742328
chr1 28440924 28440932 FEV JASPAR yes 118261704
chr1 28440941 28440945 YY1 TRANSFAC yes 27742329
chr1 28440941 28440945 YY1 TRANSFAC yes 118261705
chr1 28440955 28440959 YY1 TRANSFAC yes 27742330
chr1 28440955 28440959 YY1 TRANSFAC yes 118261706
chr1 28440975 28440981 YY1 JASPAR yes 27742331
chr1 28440975 28440981 YY1 JASPAR yes 118261707
SNP sites on vista979[chr1:28440576-28440976]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 28440735 rs541779846 C T no 190065
chr1 28440838 rs183824236 A T
FOXP1 IRF1 MEF2C TBP
190066
chr1 28440924 rs148267177 C G
FEV
190067
Genes possibly regulated by vista979[chr1:28440576-28440976]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 28296855 28415207 - EYA3 ENSG00000158161.11 28415207 0.83 0.99 404 74631
chr1 28473677 28520447 - PTAFR ENSG00000169403.7 28520447 0.84 1.0 405 20529
chr1 28527013 28527152 - AL353354.1 ENSG00000215902.1 28527152 0.0 0.0 407 13824
chr1 28527070 28527419 + AL353354.2 ENSG00000269804.1 28527070 0.98 1.0 408 13906
Expression level of Genes
Back to top
miRNAs possibly regulated by vista979[chr1:28440576-28440976]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results