EnhancerDB
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  3. vista980[chr1:28449970-28450467]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista980[chr1:28449970-28450467]
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Tissue distribution of vista980
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Transcription factor that possibly regulate vista980[chr1:28449970-28450467]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 28449962 28449982 ESR1 JASPAR yes 27743345
chr1 28449962 28449982 ESR1 JASPAR yes 118261708
chr1 28449998 28450009 PHOX2A JASPAR yes 27743346
chr1 28449998 28450009 PROP1 JASPAR yes 27743347
chr1 28449998 28450009 PHOX2A JASPAR yes 118261709
chr1 28449998 28450009 PROP1 JASPAR yes 118261710
chr1 28449999 28450011 TEF JASPAR yes 27743348
chr1 28449999 28450011 TEF JASPAR yes 118261711
chr1 28449999 28450012 ATF4 JASPAR yes 27743349
chr1 28449999 28450012 ATF4 JASPAR yes 118261712
chr1 28450001 28450015 POU4F1 JASPAR yes 27743350
chr1 28450001 28450015 POU4F1 JASPAR yes 118261713
chr1 28450001 28450017 POU4F3 JASPAR yes 27743351
chr1 28450001 28450017 POU4F3 JASPAR yes 118261714
chr1 28450004 28450008 YY1 TRANSFAC yes 27743352
chr1 28450004 28450008 YY1 TRANSFAC yes 118261715
chr1 28450013 28450021 NR4A2 JASPAR yes 27743353
chr1 28450013 28450021 NR4A2 JASPAR yes 118261716
chr1 28450052 28450073 ZNF263 JASPAR yes 27743354
chr1 28450052 28450073 ZNF263 JASPAR yes 118261717
chr1 28450059 28450080 ZNF263 JASPAR yes 27743355
chr1 28450059 28450080 ZNF263 JASPAR yes 118261718
chr1 28450075 28450088 ATF4 JASPAR yes 27743356
chr1 28450075 28450088 ATF4 JASPAR yes 118261719
chr1 28450076 28450087 CEBPA JASPAR yes 27743357
chr1 28450076 28450087 CEBPA JASPAR yes 118261720
chr1 28450077 28450088 CEBPB JASPAR yes 27743358
chr1 28450077 28450088 CEBPB JASPAR yes 118261721
chr1 28450106 28450112 YY1 JASPAR yes 27743359
chr1 28450106 28450112 YY1 JASPAR yes 118261722
chr1 28450119 28450140 ZNF263 JASPAR yes 27743360
chr1 28450119 28450140 ZNF263 JASPAR yes 118261723
chr1 28450127 28450148 ZNF263 JASPAR yes 27743361
chr1 28450127 28450148 ZNF263 JASPAR yes 118261724
chr1 28450128 28450138 ZNF740 JASPAR yes 27743362
chr1 28450128 28450138 ZNF740 JASPAR yes 118261725
chr1 28450128 28450148 RREB1 JASPAR yes 27743363
chr1 28450128 28450148 RREB1 JASPAR yes 118261726
chr1 28450131 28450141 ZNF740 JASPAR yes 27743364
chr1 28450131 28450141 ZNF740 JASPAR yes 118261727
chr1 28450138 28450159 ZNF263 JASPAR yes 27743365
chr1 28450138 28450159 ZNF263 JASPAR yes 118261728
chr1 28450165 28450169 YY1 TRANSFAC yes 27743366
chr1 28450165 28450169 YY1 TRANSFAC yes 118261729
chr1 28450172 28450186 STAT1 JASPAR yes 27743367
chr1 28450172 28450186 STAT1 JASPAR yes 118261730
chr1 28450172 28450187 STAT2 JASPAR yes 27743368
chr1 28450172 28450187 STAT2 JASPAR yes 118261731
chr1 28450173 28450187 STAT1 JASPAR yes 27743369
chr1 28450173 28450187 STAT1 JASPAR yes 118261732
chr1 28450178 28450189 ELK4 JASPAR yes 27743370
chr1 28450178 28450189 FLI1 JASPAR yes 27743371
chr1 28450178 28450189 ELK4 JASPAR yes 118261733
chr1 28450178 28450189 FLI1 JASPAR yes 118261734
chr1 28450178 28450191 ELF3 JASPAR yes 27743372
chr1 28450178 28450191 ELF3 JASPAR yes 118261735
chr1 28450179 28450183 YY1 TRANSFAC yes 27743373
chr1 28450179 28450183 YY1 TRANSFAC yes 118261736
chr1 28450179 28450190 ELF5 JASPAR yes 27743374
chr1 28450179 28450190 ELF5 JASPAR yes 118261737
chr1 28450179 28450191 EHF JASPAR yes 27743375
chr1 28450179 28450191 ELF1 JASPAR yes 27743376
chr1 28450179 28450191 ELF4 JASPAR yes 27743377
chr1 28450179 28450191 EHF JASPAR yes 118261738
chr1 28450179 28450191 ELF1 JASPAR yes 118261739
chr1 28450179 28450191 ELF4 JASPAR yes 118261740
chr1 28450179 28450192 ELF1 JASPAR yes 27743378
chr1 28450179 28450192 ELF1 JASPAR yes 118261741
chr1 28450180 28450188 FEV JASPAR yes 27743379
chr1 28450180 28450188 FEV JASPAR yes 118261742
chr1 28450183 28450204 IRF1 JASPAR yes 27743380
chr1 28450183 28450204 IRF1 JASPAR yes 118261743
chr1 28450185 28450200 STAT2 JASPAR yes 27743381
chr1 28450185 28450200 STAT2 JASPAR yes 118261744
chr1 28450186 28450200 STAT1 JASPAR yes 27743382
chr1 28450186 28450200 STAT1 JASPAR yes 118261745
chr1 28450187 28450199 IRF1 JASPAR yes 27743383
chr1 28450187 28450199 IRF1 JASPAR yes 118261746
chr1 28450208 28450212 NFE TRANSFAC yes 27743384
chr1 28450208 28450212 NFE TRANSFAC yes 118261747
chr1 28450212 28450223 ELK4 JASPAR yes 27743385
chr1 28450212 28450223 FLI1 JASPAR yes 27743386
chr1 28450212 28450223 ELK4 JASPAR yes 118261748
chr1 28450212 28450223 FLI1 JASPAR yes 118261749
chr1 28450213 28450223 ERF JASPAR yes 27743387
chr1 28450213 28450223 ETV6 JASPAR yes 27743388
chr1 28450213 28450223 ERF JASPAR yes 118261750
chr1 28450213 28450223 ETV6 JASPAR yes 118261751
chr1 28450213 28450226 ELF1 JASPAR yes 27743389
chr1 28450213 28450226 ELF1 JASPAR yes 118261752
chr1 28450214 28450221 SPI1 JASPAR yes 27743390
chr1 28450214 28450221 SPI1 JASPAR yes 118261753
chr1 28450214 28450222 EHF JASPAR yes 27743391
chr1 28450214 28450222 FEV JASPAR yes 27743392
chr1 28450214 28450222 EHF JASPAR yes 118261754
chr1 28450214 28450222 FEV JASPAR yes 118261755
chr1 28450219 28450225 NFE2 TRANSFAC yes 27743393
chr1 28450219 28450225 NFE2 TRANSFAC yes 118261756
chr1 28450240 28450261 ZNF263 JASPAR yes 27743394
chr1 28450240 28450261 ZNF263 JASPAR yes 118261757
chr1 28450291 28450296 ETS2 TRANSFAC yes 27743395
chr1 28450291 28450296 ETS2 TRANSFAC yes 118261758
chr1 28450305 28450309 YY1 TRANSFAC yes 27743396
chr1 28450305 28450309 YY1 TRANSFAC yes 118261759
chr1 28450318 28450339 MAFG JASPAR yes 27743397
chr1 28450318 28450339 MAFG JASPAR yes 118261760
chr1 28450324 28450335 NFE2L2 JASPAR yes 27743398
chr1 28450324 28450335 NFE2L2 JASPAR yes 118261761
chr1 28450367 28450373 MZF1 JASPAR yes 27743399
chr1 28450367 28450373 MZF1 JASPAR yes 118261762
chr1 28450377 28450391 RORA JASPAR yes 27743400
chr1 28450377 28450391 RORA JASPAR yes 118261763
chr1 28450378 28450388 RORA JASPAR yes 27743401
chr1 28450378 28450388 RORA JASPAR yes 118261764
chr1 28450383 28450397 STAT1 JASPAR yes 27743402
chr1 28450383 28450397 STAT1 JASPAR yes 118261765
chr1 28450409 28450424 FOXP1 JASPAR yes 27743403
chr1 28450409 28450424 FOXP1 JASPAR yes 118261766
chr1 28450422 28450433 JUND JASPAR yes 27743404
chr1 28450422 28450433 JUND JASPAR yes 118261767
chr1 28450424 28450430 JUN TRANSFAC yes 27743405
chr1 28450424 28450430 JUN TRANSFAC yes 118261768
chr1 28450426 28450437 FOXH1 JASPAR yes 27743406
chr1 28450426 28450437 FOXH1 JASPAR yes 118261769
chr1 28450444 28450447 MYB TRANSFAC yes 27743407
chr1 28450444 28450447 MYB TRANSFAC yes 118261770
chr1 28450462 28450465 MYB TRANSFAC yes 27743408
chr1 28450462 28450465 MYB TRANSFAC yes 118261771
chr1 28450465 28450469 YY1 TRANSFAC yes 27743409
chr1 28450465 28450469 YY1 TRANSFAC yes 118261772
SNP sites on vista980[chr1:28449970-28450467]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 28450234 rs143689555 A T no 190137
chr1 28450288 rs11806397 G A no 190138
chr1 28450322 rs542756236 A T
MAFG
190139
Genes possibly regulated by vista980[chr1:28449970-28450467]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 28296855 28415207 - EYA3 ENSG00000158161.11 28415207 0.83 0.99 404 65237
chr1 28473677 28520447 - PTAFR ENSG00000169403.7 28520447 0.84 1.0 405 30020
chr1 28527013 28527152 - AL353354.1 ENSG00000215902.1 28527152 0.0 0.0 407 23315
chr1 28527070 28527419 + AL353354.2 ENSG00000269804.1 28527070 0.98 1.0 408 23397
Expression level of Genes
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miRNAs possibly regulated by vista980[chr1:28449970-28450467]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results