EnhancerDB
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  3. vista982[chr1:28454216-28454379]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista982[chr1:28454216-28454379]
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Tissue distribution of vista982
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Transcription factor that possibly regulate vista982[chr1:28454216-28454379]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 28454227 28454232 NFY TRANSFAC yes 27743955
chr1 28454227 28454232 NFY TRANSFAC yes 118261848
chr1 28454235 28454245 POU6F2 JASPAR yes 27743956
chr1 28454235 28454245 POU6F2 JASPAR yes 118261849
chr1 28454236 28454246 GSX1 JASPAR yes 27743957
chr1 28454236 28454246 GSX2 JASPAR yes 27743958
chr1 28454236 28454246 GSX1 JASPAR yes 118261850
chr1 28454236 28454246 GSX2 JASPAR yes 118261851
chr1 28454236 28454247 HOXC13 JASPAR yes 27743959
chr1 28454236 28454247 HOXC13 JASPAR yes 118261852
chr1 28454237 28454245 NKX6-1 JASPAR yes 27743960
chr1 28454237 28454245 NKX6-2 JASPAR yes 27743961
chr1 28454237 28454245 NKX6-1 JASPAR yes 118261853
chr1 28454237 28454245 NKX6-2 JASPAR yes 118261854
chr1 28454239 28454243 YY1 TRANSFAC yes 27743962
chr1 28454239 28454243 YY1 TRANSFAC yes 118261855
chr1 28454244 28454259 LEF1 JASPAR yes 27743963
chr1 28454244 28454259 LEF1 JASPAR yes 118261856
chr1 28454260 28454266 GATA3 JASPAR yes 27743964
chr1 28454260 28454266 GATA3 JASPAR yes 118261857
chr1 28454264 28454278 ONECUT1 JASPAR yes 27743965
chr1 28454264 28454278 ONECUT2 JASPAR yes 27743966
chr1 28454264 28454278 ONECUT3 JASPAR yes 27743967
chr1 28454264 28454278 ONECUT1 JASPAR yes 118261858
chr1 28454264 28454278 ONECUT2 JASPAR yes 118261859
chr1 28454264 28454278 ONECUT3 JASPAR yes 118261860
chr1 28454268 28454277 SOX9 JASPAR yes 27743968
chr1 28454268 28454277 SOX9 JASPAR yes 118261861
chr1 28454283 28454295 PKNOX2 JASPAR yes 27743969
chr1 28454283 28454295 PKNOX2 JASPAR yes 118261862
chr1 28454291 28454306 IRF9 JASPAR yes 27743970
chr1 28454291 28454306 IRF9 JASPAR yes 118261863
chr1 28454292 28454306 IRF8 JASPAR yes 27743971
chr1 28454292 28454306 IRF8 JASPAR yes 118261864
chr1 28454293 28454307 STAT1 JASPAR yes 27743972
chr1 28454293 28454307 STAT1 JASPAR yes 118261865
chr1 28454293 28454308 STAT2 JASPAR yes 27743973
chr1 28454293 28454308 STAT2 JASPAR yes 118261866
chr1 28454303 28454324 IRF1 JASPAR yes 27743974
chr1 28454303 28454324 IRF1 JASPAR yes 118261867
chr1 28454307 28454321 SPI1 JASPAR yes 27743975
chr1 28454307 28454321 SPIC JASPAR yes 27743976
chr1 28454307 28454321 SPI1 JASPAR yes 118261868
chr1 28454307 28454321 SPIC JASPAR yes 118261869
chr1 28454307 28454322 STAT2 JASPAR yes 27743977
chr1 28454307 28454322 STAT2 JASPAR yes 118261870
chr1 28454311 28454321 ETV6 JASPAR yes 27743978
chr1 28454311 28454321 ETV6 JASPAR yes 118261871
chr1 28454313 28454318 ETS2 TRANSFAC yes 27743979
chr1 28454313 28454318 ETS2 TRANSFAC yes 118261872
chr1 28454320 28454324 ESR1 TRANSFAC yes 27743980
chr1 28454320 28454324 ESR1 TRANSFAC yes 118261873
chr1 28454333 28454348 SCRT1 JASPAR yes 27743981
chr1 28454333 28454348 SCRT1 JASPAR yes 118261874
chr1 28454349 28454353 NFE TRANSFAC yes 27743982
chr1 28454349 28454353 NFE TRANSFAC yes 118261875
SNP sites on vista982[chr1:28454216-28454379]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista982[chr1:28454216-28454379]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 28296855 28415207 - EYA3 ENSG00000158161.11 28415207 0.83 0.99 404 60991
chr1 28473677 28520447 - PTAFR ENSG00000169403.7 28520447 0.84 1.0 405 33932
chr1 28527013 28527152 - AL353354.1 ENSG00000215902.1 28527152 0.0 0.0 407 27227
chr1 28527070 28527419 + AL353354.2 ENSG00000269804.1 28527070 0.98 1.0 408 27309
Expression level of Genes
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miRNAs possibly regulated by vista982[chr1:28454216-28454379]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results