EnhancerDB
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  3. vista983[chr1:28462161-28462385]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista983[chr1:28462161-28462385]
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Tissue distribution of vista983
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Transcription factor that possibly regulate vista983[chr1:28462161-28462385]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 28462216 28462231 FOXA1 JASPAR yes 27745133
chr1 28462216 28462231 FOXA1 JASPAR yes 118261876
chr1 28462217 28462229 FOXI1 JASPAR yes 27745134
chr1 28462217 28462229 FOXI1 JASPAR yes 118261877
chr1 28462217 28462232 FOXP1 JASPAR yes 27745135
chr1 28462217 28462232 FOXP1 JASPAR yes 118261878
chr1 28462218 28462229 FOXP2 JASPAR yes 27745136
chr1 28462218 28462229 FOXP2 JASPAR yes 118261879
chr1 28462218 28462230 FOXC2 JASPAR yes 27745137
chr1 28462218 28462230 FOXC2 JASPAR yes 118261880
chr1 28462218 28462232 FOXF2 JASPAR yes 27745138
chr1 28462218 28462232 FOXF2 JASPAR yes 118261881
chr1 28462219 28462233 STAT1 JASPAR yes 27745139
chr1 28462219 28462233 STAT1 JASPAR yes 118261882
chr1 28462220 28462231 FOXA1 JASPAR yes 27745140
chr1 28462220 28462231 FOXA1 JASPAR yes 118261883
chr1 28462224 28462228 YY1 TRANSFAC yes 27745141
chr1 28462224 28462228 YY1 TRANSFAC yes 118261884
chr1 28462252 28462266 RORA JASPAR yes 27745142
chr1 28462252 28462266 RORA JASPAR yes 118261885
chr1 28462256 28462266 HMBOX1 JASPAR yes 27745143
chr1 28462256 28462266 HMBOX1 JASPAR yes 118261886
chr1 28462257 28462265 LBX1 JASPAR yes 27745144
chr1 28462257 28462265 LBX1 JASPAR yes 118261887
chr1 28462274 28462295 IRF1 JASPAR yes 27745145
chr1 28462274 28462295 IRF1 JASPAR yes 118261888
chr1 28462278 28462292 SPI1 JASPAR yes 27745146
chr1 28462278 28462292 SPIC JASPAR yes 27745147
chr1 28462278 28462292 SPI1 JASPAR yes 118261889
chr1 28462278 28462292 SPIC JASPAR yes 118261890
chr1 28462279 28462292 ELF1 JASPAR yes 27745148
chr1 28462279 28462292 ELF1 JASPAR yes 118261891
chr1 28462280 28462292 EHF JASPAR yes 27745149
chr1 28462280 28462292 ELF4 JASPAR yes 27745150
chr1 28462280 28462292 EHF JASPAR yes 118261892
chr1 28462280 28462292 ELF4 JASPAR yes 118261893
chr1 28462281 28462292 ELF5 JASPAR yes 27745151
chr1 28462281 28462292 ELF5 JASPAR yes 118261894
chr1 28462282 28462289 SPIB JASPAR yes 27745152
chr1 28462282 28462289 SPIB JASPAR yes 118261895
chr1 28462282 28462292 ETV6 JASPAR yes 27745153
chr1 28462282 28462292 ETV6 JASPAR yes 118261896
chr1 28462283 28462291 EHF JASPAR yes 27745154
chr1 28462283 28462291 EHF JASPAR yes 118261897
chr1 28462284 28462291 SPI1 JASPAR yes 27745155
chr1 28462284 28462291 SPI1 JASPAR yes 118261898
chr1 28462328 28462331 MYB TRANSFAC yes 27745156
chr1 28462328 28462331 MYB TRANSFAC yes 118261899
chr1 28462355 28462359 TEAD2 TRANSFAC yes 27745157
chr1 28462355 28462359 TEAD2 TRANSFAC yes 118261900
chr1 28462358 28462363 ETS2 TRANSFAC yes 27745158
chr1 28462358 28462363 ETS2 TRANSFAC yes 118261901
chr1 28462358 28462368 TEAD1 JASPAR yes 27745159
chr1 28462358 28462368 TEAD4 JASPAR yes 27745160
chr1 28462358 28462368 TEAD1 JASPAR yes 118261902
chr1 28462358 28462368 TEAD4 JASPAR yes 118261903
chr1 28462359 28462367 TEAD3 JASPAR yes 27745161
chr1 28462359 28462367 TEAD3 JASPAR yes 118261904
SNP sites on vista983[chr1:28462161-28462385]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 28462197 rs143537921 G A no 190270
chr1 28462376 rs147164596 G A no 190271
Genes possibly regulated by vista983[chr1:28462161-28462385]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 28296855 28415207 - EYA3 ENSG00000158161.11 28415207 0.83 0.99 404 53046
chr1 28473677 28520447 - PTAFR ENSG00000169403.7 28520447 0.84 1.0 405 41938
chr1 28525967 28559536 - DNAJC8 ENSG00000126698.6 28559536 0.64 0.99 406 2849
chr1 28527013 28527152 - AL353354.1 ENSG00000215902.1 28527152 0.0 0.0 407 35233
chr1 28527070 28527419 + AL353354.2 ENSG00000269804.1 28527070 0.98 1.0 408 35315
Expression level of Genes
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miRNAs possibly regulated by vista983[chr1:28462161-28462385]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results