EnhancerDB
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  3. vista985[chr1:28466458-28466562]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista985[chr1:28466458-28466562]
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Tissue distribution of vista985
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Transcription factor that possibly regulate vista985[chr1:28466458-28466562]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 28466462 28466477 RFX5 JASPAR yes 27745783
chr1 28466462 28466477 RFX5 JASPAR yes 118261953
chr1 28466478 28466490 PROX1 JASPAR yes 27745784
chr1 28466478 28466490 PROX1 JASPAR yes 118261954
chr1 28466488 28466503 FOXP1 JASPAR yes 27745785
chr1 28466488 28466503 FOXP1 JASPAR yes 118261955
chr1 28466489 28466504 FOXP1 JASPAR yes 27745786
chr1 28466489 28466504 FOXP1 JASPAR yes 118261956
chr1 28466489 28466510 IRF1 JASPAR yes 27745787
chr1 28466489 28466510 IRF1 JASPAR yes 118261957
chr1 28466490 28466505 FOXP1 JASPAR yes 27745788
chr1 28466490 28466505 FOXP1 JASPAR yes 118261958
chr1 28466490 28466511 IRF1 JASPAR yes 27745789
chr1 28466490 28466511 IRF1 JASPAR yes 118261959
chr1 28466491 28466506 FOXP1 JASPAR yes 27745790
chr1 28466491 28466506 FOXP1 JASPAR yes 118261960
chr1 28466491 28466512 IRF1 JASPAR yes 27745791
chr1 28466491 28466512 IRF1 JASPAR yes 118261961
chr1 28466492 28466507 FOXP1 JASPAR yes 27745792
chr1 28466492 28466507 FOXP1 JASPAR yes 118261962
chr1 28466494 28466509 FOXP1 JASPAR yes 27745793
chr1 28466494 28466509 FOXP1 JASPAR yes 118261963
chr1 28466495 28466516 IRF1 JASPAR yes 27745794
chr1 28466495 28466516 IRF1 JASPAR yes 118261964
chr1 28466496 28466511 FOXP1 JASPAR yes 27745795
chr1 28466496 28466511 FOXP1 JASPAR yes 118261965
chr1 28466497 28466518 IRF1 JASPAR yes 27745796
chr1 28466497 28466518 IRF1 JASPAR yes 118261966
chr1 28466499 28466513 STAT1 JASPAR yes 27745797
chr1 28466499 28466513 STAT1 JASPAR yes 118261967
chr1 28466499 28466514 PRDM1 JASPAR yes 27745798
chr1 28466499 28466514 STAT2 JASPAR yes 27745799
chr1 28466499 28466514 PRDM1 JASPAR yes 118261968
chr1 28466499 28466514 STAT2 JASPAR yes 118261969
chr1 28466501 28466522 IRF1 JASPAR yes 27745800
chr1 28466501 28466522 IRF1 JASPAR yes 118261970
chr1 28466503 28466524 ZNF263 JASPAR yes 27745801
chr1 28466503 28466524 ZNF263 JASPAR yes 118261971
chr1 28466505 28466519 SPI1 JASPAR yes 27745802
chr1 28466505 28466519 SPIC JASPAR yes 27745803
chr1 28466505 28466519 SPI1 JASPAR yes 118261972
chr1 28466505 28466519 SPIC JASPAR yes 118261973
chr1 28466506 28466527 ZNF263 JASPAR yes 27745804
chr1 28466506 28466527 ZNF263 JASPAR yes 118261974
chr1 28466509 28466516 SPIB JASPAR yes 27745805
chr1 28466509 28466516 SPIB JASPAR yes 118261975
chr1 28466509 28466530 ZNF263 JASPAR yes 27745806
chr1 28466509 28466530 ZNF263 JASPAR yes 118261976
chr1 28466510 28466518 EHF JASPAR yes 27745807
chr1 28466510 28466518 EHF JASPAR yes 118261977
chr1 28466510 28466531 ZNF263 JASPAR yes 27745808
chr1 28466510 28466531 ZNF263 JASPAR yes 118261978
chr1 28466513 28466534 ZNF263 JASPAR yes 27745809
chr1 28466513 28466534 ZNF263 JASPAR yes 118261979
chr1 28466514 28466519 ETS2 TRANSFAC yes 27745810
chr1 28466514 28466519 ETS2 TRANSFAC yes 118261980
chr1 28466514 28466522 EHF JASPAR yes 27745811
chr1 28466514 28466522 EHF JASPAR yes 118261981
chr1 28466514 28466535 ZNF263 JASPAR yes 27745812
chr1 28466514 28466535 ZNF263 JASPAR yes 118261982
chr1 28466517 28466538 ZNF263 JASPAR yes 27745813
chr1 28466517 28466538 ZNF263 JASPAR yes 118261983
chr1 28466518 28466523 ETS2 TRANSFAC yes 27745814
chr1 28466518 28466523 ETS2 TRANSFAC yes 118261984
chr1 28466518 28466526 EHF JASPAR yes 27745815
chr1 28466518 28466526 EHF JASPAR yes 118261985
chr1 28466518 28466539 ZNF263 JASPAR yes 27745816
chr1 28466518 28466539 ZNF263 JASPAR yes 118261986
chr1 28466521 28466542 ZNF263 JASPAR yes 27745817
chr1 28466521 28466542 ZNF263 JASPAR yes 118261987
chr1 28466522 28466527 ETS2 TRANSFAC yes 27745818
chr1 28466522 28466527 ETS2 TRANSFAC yes 118261988
chr1 28466522 28466530 EHF JASPAR yes 27745819
chr1 28466522 28466530 EHF JASPAR yes 118261989
chr1 28466522 28466543 ZNF263 JASPAR yes 27745820
chr1 28466522 28466543 ZNF263 JASPAR yes 118261990
chr1 28466525 28466538 ELF1 JASPAR yes 27745821
chr1 28466525 28466538 ELF1 JASPAR yes 118261991
chr1 28466525 28466546 ZNF263 JASPAR yes 27745822
chr1 28466525 28466546 ZNF263 JASPAR yes 118261992
chr1 28466528 28466534 PEA3 TRANSFAC yes 27745823
chr1 28466528 28466534 PEA3 TRANSFAC yes 118261993
chr1 28466528 28466539 FLI1 JASPAR yes 27745824
chr1 28466528 28466539 FLI1 JASPAR yes 118261994
chr1 28466529 28466537 FEV JASPAR yes 27745825
chr1 28466529 28466537 FEV JASPAR yes 118261995
SNP sites on vista985[chr1:28466458-28466562]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 28466486 rs571628555 C T
PROX1
190310
chr1 28466511 rs4068756 G GA,GAAGAA
EHF FOXP1 IRF1 PRDM1 SPI1 SPIB SPIC STAT1 STAT2 ZNF263
190311
Genes possibly regulated by vista985[chr1:28466458-28466562]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 28296855 28415207 - EYA3 ENSG00000158161.11 28415207 0.83 0.99 404 48749
chr1 28473677 28520447 - PTAFR ENSG00000169403.7 28520447 0.84 1.0 405 46115
chr1 28525967 28559536 - DNAJC8 ENSG00000126698.6 28559536 0.64 0.99 406 7026
chr1 28527013 28527152 - AL353354.1 ENSG00000215902.1 28527152 0.0 0.0 407 39410
chr1 28527070 28527419 + AL353354.2 ENSG00000269804.1 28527070 0.98 1.0 408 39492
chr1 28562620 28573417 + ATPIF1 ENSG00000130770.13 28562620 0.9 0.99 409 3942
Expression level of Genes
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miRNAs possibly regulated by vista985[chr1:28466458-28466562]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results