EnhancerDB
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  3. vista986[chr1:28481060-28481439]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista986[chr1:28481060-28481439]
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Tissue distribution of vista986
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Transcription factor that possibly regulate vista986[chr1:28481060-28481439]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 28481049 28481060 FOSL2 JASPAR yes 27747230
chr1 28481049 28481060 FOSL2 JASPAR yes 118261996
chr1 28481082 28481091 NFIX JASPAR yes 27747231
chr1 28481082 28481091 NFIX JASPAR yes 118261997
chr1 28481084 28481090 NFIC JASPAR yes 27747232
chr1 28481084 28481090 NFIC JASPAR yes 118261998
chr1 28481090 28481095 SP1 TRANSFAC yes 27747233
chr1 28481090 28481095 SP1 TRANSFAC yes 118261999
chr1 28481095 28481101 ZNF354C JASPAR yes 27747234
chr1 28481095 28481101 ZNF354C JASPAR yes 118262000
chr1 28481131 28481135 LFA1 TRANSFAC yes 27747235
chr1 28481131 28481135 LFA1 TRANSFAC yes 118262001
chr1 28481139 28481152 NFKB1 JASPAR yes 27747236
chr1 28481139 28481152 NFKB2 JASPAR yes 27747237
chr1 28481139 28481152 NFKB1 JASPAR yes 118262002
chr1 28481139 28481152 NFKB2 JASPAR yes 118262003
chr1 28481169 28481188 PAX5 JASPAR yes 27747238
chr1 28481169 28481188 PAX5 JASPAR yes 118262004
chr1 28481188 28481193 SP1 TRANSFAC yes 27747239
chr1 28481188 28481193 SP1 TRANSFAC yes 118262005
chr1 28481188 28481197 HIC2 JASPAR yes 27747240
chr1 28481188 28481197 HIC2 JASPAR yes 118262006
chr1 28481191 28481195 LFA1 TRANSFAC yes 27747241
chr1 28481191 28481195 LFA1 TRANSFAC yes 118262007
chr1 28481255 28481272 ESR1 JASPAR yes 27747242
chr1 28481255 28481272 ESR1 JASPAR yes 118262008
chr1 28481295 28481314 PAX5 JASPAR yes 27747243
chr1 28481295 28481314 PAX5 JASPAR yes 118262009
chr1 28481299 28481310 NFE2L2 JASPAR yes 27747244
chr1 28481299 28481310 NFE2L2 JASPAR yes 118262010
chr1 28481315 28481319 NFE TRANSFAC yes 27747245
chr1 28481315 28481319 NFE TRANSFAC yes 118262011
chr1 28481319 28481334 FOXP1 JASPAR yes 27747246
chr1 28481319 28481334 FOXP1 JASPAR yes 118262012
chr1 28481320 28481335 FOXP1 JASPAR yes 27747247
chr1 28481320 28481335 FOXP1 JASPAR yes 118262013
chr1 28481321 28481336 FOXP1 JASPAR yes 27747248
chr1 28481321 28481336 FOXP1 JASPAR yes 118262014
chr1 28481321 28481342 IRF1 JASPAR yes 27747249
chr1 28481321 28481342 IRF1 JASPAR yes 118262015
chr1 28481322 28481337 FOXP1 JASPAR yes 27747250
chr1 28481322 28481337 FOXP1 JASPAR yes 118262016
chr1 28481322 28481343 IRF1 JASPAR yes 27747251
chr1 28481322 28481343 IRF1 JASPAR yes 118262017
chr1 28481323 28481338 FOXP1 JASPAR yes 27747252
chr1 28481323 28481338 FOXP1 JASPAR yes 118262018
chr1 28481323 28481344 IRF1 JASPAR yes 27747253
chr1 28481323 28481344 IRF1 JASPAR yes 118262019
chr1 28481324 28481339 FOXP1 JASPAR yes 27747254
chr1 28481324 28481339 FOXP1 JASPAR yes 118262020
chr1 28481324 28481345 IRF1 JASPAR yes 27747255
chr1 28481324 28481345 IRF1 JASPAR yes 118262021
chr1 28481325 28481340 FOXP1 JASPAR yes 27747256
chr1 28481325 28481340 FOXP1 JASPAR yes 118262022
chr1 28481326 28481341 FOXP1 JASPAR yes 27747257
chr1 28481326 28481341 FOXP1 JASPAR yes 118262023
chr1 28481327 28481342 FOXP1 JASPAR yes 27747258
chr1 28481327 28481342 FOXP1 JASPAR yes 118262024
chr1 28481327 28481348 IRF1 JASPAR yes 27747259
chr1 28481327 28481348 IRF1 JASPAR yes 118262025
chr1 28481328 28481343 FOXP1 JASPAR yes 27747260
chr1 28481328 28481343 FOXP1 JASPAR yes 118262026
chr1 28481331 28481346 PRDM1 JASPAR yes 27747261
chr1 28481331 28481346 STAT2 JASPAR yes 27747262
chr1 28481331 28481346 PRDM1 JASPAR yes 118262027
chr1 28481331 28481346 STAT2 JASPAR yes 118262028
chr1 28481338 28481359 ZNF263 JASPAR yes 27747263
chr1 28481338 28481359 ZNF263 JASPAR yes 118262029
chr1 28481342 28481352 SP1 JASPAR yes 27747264
chr1 28481342 28481352 ZNF740 JASPAR yes 27747265
chr1 28481342 28481352 SP1 JASPAR yes 118262030
chr1 28481342 28481352 ZNF740 JASPAR yes 118262031
chr1 28481343 28481353 ZNF740 JASPAR yes 27747266
chr1 28481343 28481353 ZNF740 JASPAR yes 118262032
chr1 28481344 28481354 SP1 JASPAR yes 27747267
chr1 28481344 28481354 ZNF740 JASPAR yes 27747268
chr1 28481344 28481354 SP1 JASPAR yes 118262033
chr1 28481344 28481354 ZNF740 JASPAR yes 118262034
chr1 28481346 28481356 SP1 JASPAR yes 27747269
chr1 28481346 28481356 SP1 JASPAR yes 118262035
chr1 28481347 28481357 SP1 JASPAR yes 27747270
chr1 28481347 28481357 SP1 JASPAR yes 118262036
chr1 28481349 28481355 MAZ TRANSFAC yes 27747271
chr1 28481349 28481355 MAZ TRANSFAC yes 118262037
chr1 28481349 28481360 E2F6 JASPAR yes 27747272
chr1 28481349 28481360 E2F6 JASPAR yes 118262038
chr1 28481351 28481359 SP1 TRANSFAC yes 27747273
chr1 28481351 28481359 SP1 TRANSFAC yes 118262039
chr1 28481353 28481359 MAZ TRANSFAC yes 27747274
chr1 28481353 28481359 MAZ TRANSFAC yes 118262040
chr1 28481357 28481361 LFA1 TRANSFAC yes 27747275
chr1 28481357 28481361 LFA1 TRANSFAC yes 118262041
chr1 28481366 28481371 GATA2 JASPAR yes 27747276
chr1 28481366 28481371 GATA2 JASPAR yes 118262042
chr1 28481373 28481388 AR JASPAR yes 27747277
chr1 28481373 28481388 AR JASPAR yes 118262043
chr1 28481408 28481412 YY1 TRANSFAC yes 27747278
chr1 28481408 28481412 YY1 TRANSFAC yes 118262044
chr1 28481413 28481418 MYC TRANSFAC yes 27747279
chr1 28481413 28481418 MYC TRANSFAC yes 118262045
chr1 28481419 28481434 TFAP2C JASPAR yes 27747280
chr1 28481419 28481434 TFAP2C JASPAR yes 118262046
chr1 28481419 28481438 CTCF JASPAR yes 27747281
chr1 28481419 28481438 CTCF JASPAR yes 118262047
chr1 28481428 28481434 PEA3 TRANSFAC yes 27747282
chr1 28481428 28481434 PEA3 TRANSFAC yes 118262048
SNP sites on vista986[chr1:28481060-28481439]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 28481148 rs143081635 C A
NFKB1 NFKB2
190442
chr1 28481231 rs528738489 G A no 190443
chr1 28481267 rs187645827 G A
ESR1
190444
chr1 28481281 rs12071522 C G no 190445
chr1 28481347 rs141599085 G C
IRF1 SP1 ZNF263 ZNF740
190446
chr1 28481351 rs565980107 G A
E2F6 MAZ SP1 ZNF263 ZNF740
190447
Genes possibly regulated by vista986[chr1:28481060-28481439]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 28296855 28415207 - EYA3 ENSG00000158161.11 28415207 0.83 0.99 404 34147
chr1 28473677 28520447 - PTAFR ENSG00000169403.7 28520447 0.84 1.0 405 60992
chr1 28525967 28559536 - DNAJC8 ENSG00000126698.6 28559536 0.64 0.99 406 21903
chr1 28527013 28527152 - AL353354.1 ENSG00000215902.1 28527152 0.0 0.0 407 54287
chr1 28527070 28527419 + AL353354.2 ENSG00000269804.1 28527070 0.98 1.0 408 54369
chr1 28562620 28573417 + ATPIF1 ENSG00000130770.13 28562620 0.9 0.99 409 18819
Expression level of Genes
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miRNAs possibly regulated by vista986[chr1:28481060-28481439]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results