EnhancerDB
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  3. vista988[chr1:28485616-28486049]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista988[chr1:28485616-28486049]
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Tissue distribution of vista988
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Transcription factor that possibly regulate vista988[chr1:28485616-28486049]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 28485615 28485619 NFE TRANSFAC yes 27747870
chr1 28485615 28485619 NFE TRANSFAC yes 118262104
chr1 28485636 28485657 ZNF263 JASPAR yes 27747871
chr1 28485636 28485657 ZNF263 JASPAR yes 118262105
chr1 28485639 28485645 PEA3 TRANSFAC yes 27747872
chr1 28485639 28485645 PEA3 TRANSFAC yes 118262106
chr1 28485639 28485660 ZNF263 JASPAR yes 27747873
chr1 28485639 28485660 ZNF263 JASPAR yes 118262107
chr1 28485641 28485656 AR JASPAR yes 27747874
chr1 28485641 28485656 AR JASPAR yes 118262108
chr1 28485651 28485660 THAP1 JASPAR yes 27747875
chr1 28485651 28485660 THAP1 JASPAR yes 118262109
chr1 28485654 28485658 LFA1 TRANSFAC yes 27747876
chr1 28485654 28485658 LFA1 TRANSFAC yes 118262110
chr1 28485672 28485685 JUN JASPAR yes 27747877
chr1 28485672 28485685 JUN JASPAR yes 118262111
chr1 28485684 28485689 GATA2 JASPAR yes 27747878
chr1 28485684 28485689 GATA2 JASPAR yes 118262112
chr1 28485744 28485759 LEF1 JASPAR yes 27747879
chr1 28485744 28485759 LEF1 JASPAR yes 118262113
chr1 28485751 28485756 ETS2 TRANSFAC yes 27747880
chr1 28485751 28485756 ETS2 TRANSFAC yes 118262114
chr1 28485751 28485772 ZNF263 JASPAR yes 27747881
chr1 28485751 28485772 ZNF263 JASPAR yes 118262115
chr1 28485754 28485775 ZNF263 JASPAR yes 27747882
chr1 28485754 28485775 ZNF263 JASPAR yes 118262116
chr1 28485825 28485840 TFAP2C JASPAR yes 27747883
chr1 28485825 28485840 TFAP2C JASPAR yes 118262117
chr1 28485826 28485840 PLAG1 JASPAR yes 27747884
chr1 28485826 28485840 PLAG1 JASPAR yes 118262118
chr1 28485827 28485842 TFAP2A JASPAR yes 27747885
chr1 28485827 28485842 TFAP2C JASPAR yes 27747886
chr1 28485827 28485842 TFAP2A JASPAR yes 118262119
chr1 28485827 28485842 TFAP2C JASPAR yes 118262120
chr1 28485835 28485840 ETS2 TRANSFAC yes 27747887
chr1 28485835 28485840 ETS2 TRANSFAC yes 118262121
chr1 28485857 28485862 ETS2 TRANSFAC yes 27747888
chr1 28485857 28485862 ETS2 TRANSFAC yes 118262122
chr1 28485867 28485871 LFA1 TRANSFAC yes 27747889
chr1 28485867 28485871 LFA1 TRANSFAC yes 118262123
chr1 28485881 28485896 RUNX2 JASPAR yes 27747890
chr1 28485881 28485896 RUNX2 JASPAR yes 118262124
chr1 28485899 28485910 NFE2L2 JASPAR yes 27747891
chr1 28485899 28485910 NFE2L2 JASPAR yes 118262125
chr1 28485915 28485926 FOXA1 JASPAR yes 27747892
chr1 28485915 28485926 FOXA1 JASPAR yes 118262126
chr1 28485915 28485930 FOXA1 JASPAR yes 27747893
chr1 28485915 28485930 FOXA1 JASPAR yes 118262127
chr1 28485916 28485928 FOXC2 JASPAR yes 27747894
chr1 28485916 28485928 FOXC2 JASPAR yes 118262128
chr1 28485925 28485935 ETV3 JASPAR yes 27747895
chr1 28485925 28485935 ETV3 JASPAR yes 118262129
chr1 28485933 28485941 FOXO3 JASPAR yes 27747896
chr1 28485933 28485941 FOXO3 JASPAR yes 118262130
chr1 28485937 28485949 POU2F1 JASPAR yes 27747897
chr1 28485937 28485949 POU2F1 JASPAR yes 118262131
chr1 28485937 28485951 POU1F1 JASPAR yes 27747898
chr1 28485937 28485951 POU1F1 JASPAR yes 118262132
chr1 28485941 28485955 ONECUT1 JASPAR yes 27747899
chr1 28485941 28485955 ONECUT2 JASPAR yes 27747900
chr1 28485941 28485955 ONECUT1 JASPAR yes 118262133
chr1 28485941 28485955 ONECUT2 JASPAR yes 118262134
chr1 28485952 28485962 TFEC JASPAR yes 27747901
chr1 28485952 28485962 TFEC JASPAR yes 118262135
chr1 28485952 28485963 USF1 JASPAR yes 27747902
chr1 28485952 28485963 USF2 JASPAR yes 27747903
chr1 28485952 28485963 USF1 JASPAR yes 118262136
chr1 28485952 28485963 USF2 JASPAR yes 118262137
chr1 28485957 28485970 DUXA JASPAR yes 27747904
chr1 28485957 28485970 DUXA JASPAR yes 118262138
chr1 28485960 28485970 SREBF2 JASPAR yes 27747905
chr1 28485960 28485970 SREBF2 JASPAR yes 118262139
chr1 28485964 28485975 USF1 JASPAR yes 27747906
chr1 28485964 28485975 USF1 JASPAR yes 118262140
chr1 28485965 28485975 MLXIPL JASPAR yes 27747907
chr1 28485965 28485975 SREBF2 JASPAR yes 27747908
chr1 28485965 28485975 TFE3 JASPAR yes 27747909
chr1 28485965 28485975 TFEB JASPAR yes 27747910
chr1 28485965 28485975 TFEC JASPAR yes 27747911
chr1 28485965 28485975 MLXIPL JASPAR yes 118262141
chr1 28485965 28485975 SREBF2 JASPAR yes 118262142
chr1 28485965 28485975 TFE3 JASPAR yes 118262143
chr1 28485965 28485975 TFEB JASPAR yes 118262144
chr1 28485965 28485975 TFEC JASPAR yes 118262145
chr1 28485965 28485976 USF1 JASPAR yes 27747912
chr1 28485965 28485976 USF2 JASPAR yes 27747913
chr1 28485965 28485976 USF1 JASPAR yes 118262146
chr1 28485965 28485976 USF2 JASPAR yes 118262147
chr1 28485986 28485991 MYC TRANSFAC yes 27747914
chr1 28485986 28485991 MYC TRANSFAC yes 118262148
chr1 28485987 28486002 TP53 JASPAR yes 27747915
chr1 28485987 28486002 TP53 JASPAR yes 118262149
chr1 28485987 28486007 TP53 JASPAR yes 27747916
chr1 28485987 28486007 TP53 JASPAR yes 118262150
chr1 28485995 28486015 RREB1 JASPAR yes 27747917
chr1 28485995 28486015 RREB1 JASPAR yes 118262151
chr1 28486000 28486015 NR2C2 JASPAR yes 27747918
chr1 28486000 28486015 NR2C2 JASPAR yes 118262152
chr1 28486001 28486015 RXRB JASPAR yes 27747919
chr1 28486001 28486015 RXRG JASPAR yes 27747920
chr1 28486001 28486015 RXRB JASPAR yes 118262153
chr1 28486001 28486015 RXRG JASPAR yes 118262154
chr1 28486009 28486030 ZNF263 JASPAR yes 27747921
chr1 28486009 28486030 ZNF263 JASPAR yes 118262155
chr1 28486019 28486034 PRDM1 JASPAR yes 27747922
chr1 28486019 28486034 PRDM1 JASPAR yes 118262156
SNP sites on vista988[chr1:28485616-28486049]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 28485951 rs114411635 A G
ONECUT1 ONECUT2 POU1F1
190490
chr1 28485995 rs180816791 C T
RREB1 TP53
190491
Genes possibly regulated by vista988[chr1:28485616-28486049]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 28296855 28415207 - EYA3 ENSG00000158161.11 28415207 0.83 0.99 404 29591
chr1 28473677 28520447 - PTAFR ENSG00000169403.7 28520447 0.84 1.0 405 65602
chr1 28525967 28559536 - DNAJC8 ENSG00000126698.6 28559536 0.64 0.99 406 26513
chr1 28527013 28527152 - AL353354.1 ENSG00000215902.1 28527152 0.0 0.0 407 58897
chr1 28527070 28527419 + AL353354.2 ENSG00000269804.1 28527070 0.98 1.0 408 58979
chr1 28562620 28573417 + ATPIF1 ENSG00000130770.13 28562620 0.9 0.99 409 23429
chr1 28586038 28609002 + SESN2 ENSG00000130766.4 28586038 0.78 1.0 410 11
Expression level of Genes
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miRNAs possibly regulated by vista988[chr1:28485616-28486049]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results