EnhancerDB
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  3. vista991[chr1:28488264-28488580]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista991[chr1:28488264-28488580]
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Tissue distribution of vista991
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Transcription factor that possibly regulate vista991[chr1:28488264-28488580]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 28488264 28488285 REST JASPAR yes 27748230
chr1 28488264 28488285 REST JASPAR yes 118262240
chr1 28488265 28488284 REST JASPAR yes 27748231
chr1 28488265 28488284 REST JASPAR yes 118262241
chr1 28488282 28488287 GATA1 TRANSFAC yes 27748232
chr1 28488282 28488287 GATA1 TRANSFAC yes 118262242
chr1 28488286 28488294 BARX1 JASPAR yes 27748233
chr1 28488286 28488294 BARX1 JASPAR yes 118262243
chr1 28488295 28488299 YY1 TRANSFAC yes 27748234
chr1 28488295 28488299 YY1 TRANSFAC yes 118262244
chr1 28488308 28488313 GATA1 TRANSFAC yes 27748235
chr1 28488308 28488313 GATA1 TRANSFAC yes 118262245
chr1 28488309 28488323 TCF7L2 JASPAR yes 27748236
chr1 28488309 28488323 TCF7L2 JASPAR yes 118262246
chr1 28488312 28488326 GLIS3 JASPAR yes 27748237
chr1 28488312 28488326 GLIS3 JASPAR yes 118262247
chr1 28488313 28488319 TCF1 TRANSFAC yes 27748238
chr1 28488313 28488319 TCF1 TRANSFAC yes 118262248
chr1 28488321 28488326 SP1 TRANSFAC yes 27748239
chr1 28488321 28488326 SP1 TRANSFAC yes 118262249
chr1 28488337 28488341 TEAD2 TRANSFAC yes 27748240
chr1 28488337 28488341 TEAD2 TRANSFAC yes 118262250
chr1 28488349 28488352 MYB TRANSFAC yes 27748241
chr1 28488349 28488352 MYB TRANSFAC yes 118262251
chr1 28488349 28488363 RXRG JASPAR yes 27748242
chr1 28488349 28488363 RXRG JASPAR yes 118262252
chr1 28488352 28488362 HOXA13 JASPAR yes 27748243
chr1 28488352 28488362 HOXB13 JASPAR yes 27748244
chr1 28488352 28488362 HOXD13 JASPAR yes 27748245
chr1 28488352 28488362 HOXA13 JASPAR yes 118262253
chr1 28488352 28488362 HOXB13 JASPAR yes 118262254
chr1 28488352 28488362 HOXD13 JASPAR yes 118262255
chr1 28488354 28488358 TEAD2 TRANSFAC yes 27748246
chr1 28488354 28488358 TEAD2 TRANSFAC yes 118262256
chr1 28488354 28488359 TBP TRANSFAC yes 27748247
chr1 28488354 28488359 TBP TRANSFAC yes 118262257
chr1 28488354 28488360 TFIID TRANSFAC yes 27748248
chr1 28488354 28488360 TFIID TRANSFAC yes 118262258
chr1 28488367 28488386 PAX5 JASPAR yes 27748249
chr1 28488367 28488386 PAX5 JASPAR yes 118262259
chr1 28488368 28488380 INSM1 JASPAR yes 27748250
chr1 28488368 28488380 INSM1 JASPAR yes 118262260
chr1 28488368 28488385 RARA JASPAR yes 27748251
chr1 28488368 28488385 RXRA JASPAR yes 27748252
chr1 28488368 28488385 RARA JASPAR yes 118262261
chr1 28488368 28488385 RXRA JASPAR yes 118262262
chr1 28488386 28488392 TBP TRANSFAC yes 27748253
chr1 28488386 28488392 TBP TRANSFAC yes 118262263
chr1 28488389 28488410 IRF1 JASPAR yes 27748254
chr1 28488389 28488410 IRF1 JASPAR yes 118262264
chr1 28488390 28488405 LEF1 JASPAR yes 27748255
chr1 28488390 28488405 LEF1 JASPAR yes 118262265
chr1 28488393 28488407 SPI1 JASPAR yes 27748256
chr1 28488393 28488407 SPI1 JASPAR yes 118262266
chr1 28488398 28488403 ETS2 TRANSFAC yes 27748257
chr1 28488398 28488403 ETS2 TRANSFAC yes 118262267
chr1 28488417 28488432 HSF1 JASPAR yes 27748258
chr1 28488417 28488432 HSF1 JASPAR yes 118262268
chr1 28488418 28488431 HSF1 JASPAR yes 27748259
chr1 28488418 28488431 HSF2 JASPAR yes 27748260
chr1 28488418 28488431 HSF4 JASPAR yes 27748261
chr1 28488418 28488431 HSF1 JASPAR yes 118262269
chr1 28488418 28488431 HSF2 JASPAR yes 118262270
chr1 28488418 28488431 HSF4 JASPAR yes 118262271
chr1 28488421 28488429 RHOXF1 JASPAR yes 27748262
chr1 28488421 28488429 RHOXF1 JASPAR yes 118262272
chr1 28488441 28488455 MTF1 JASPAR yes 27748263
chr1 28488441 28488455 MTF1 JASPAR yes 118262273
chr1 28488449 28488455 TCF4 TRANSFAC yes 27748264
chr1 28488449 28488455 TCF4 TRANSFAC yes 118262274
chr1 28488470 28488483 DUXA JASPAR yes 27748265
chr1 28488470 28488483 DUXA JASPAR yes 118262275
chr1 28488471 28488482 DUX4 JASPAR yes 27748266
chr1 28488471 28488482 PHOX2A JASPAR yes 27748267
chr1 28488471 28488482 PROP1 JASPAR yes 27748268
chr1 28488471 28488482 DUX4 JASPAR yes 118262276
chr1 28488471 28488482 PHOX2A JASPAR yes 118262277
chr1 28488471 28488482 PROP1 JASPAR yes 118262278
chr1 28488472 28488483 CEBPB JASPAR yes 27748269
chr1 28488472 28488483 CEBPB JASPAR yes 118262279
chr1 28488472 28488485 ATF4 JASPAR yes 27748270
chr1 28488472 28488485 ATF4 JASPAR yes 118262280
chr1 28488473 28488486 JUN JASPAR yes 27748271
chr1 28488473 28488486 JUN JASPAR yes 118262281
chr1 28488474 28488489 AR JASPAR yes 27748272
chr1 28488474 28488489 AR JASPAR yes 118262282
chr1 28488494 28488508 STAT1 JASPAR yes 27748273
chr1 28488494 28488508 STAT1 JASPAR yes 118262283
chr1 28488494 28488509 STAT2 JASPAR yes 27748274
chr1 28488494 28488509 STAT2 JASPAR yes 118262284
chr1 28488496 28488517 IRF1 JASPAR yes 27748275
chr1 28488496 28488517 IRF1 JASPAR yes 118262285
chr1 28488498 28488513 IRF9 JASPAR yes 27748276
chr1 28488498 28488513 IRF9 JASPAR yes 118262286
chr1 28488499 28488513 IRF7 JASPAR yes 27748277
chr1 28488499 28488513 IRF8 JASPAR yes 27748278
chr1 28488499 28488513 IRF7 JASPAR yes 118262287
chr1 28488499 28488513 IRF8 JASPAR yes 118262288
chr1 28488500 28488515 STAT2 JASPAR yes 27748279
chr1 28488500 28488515 STAT2 JASPAR yes 118262289
chr1 28488501 28488513 IRF1 JASPAR yes 27748280
chr1 28488501 28488513 IRF1 JASPAR yes 118262290
chr1 28488509 28488526 ESR1 JASPAR yes 27748281
chr1 28488509 28488526 ESR1 JASPAR yes 118262291
chr1 28488517 28488532 TFAP2C JASPAR yes 27748282
chr1 28488517 28488532 TFAP2C JASPAR yes 118262292
chr1 28488518 28488532 PLAG1 JASPAR yes 27748283
chr1 28488518 28488532 PLAG1 JASPAR yes 118262293
chr1 28488520 28488532 TFAP2A JASPAR yes 27748284
chr1 28488520 28488532 TFAP2B JASPAR yes 27748285
chr1 28488520 28488532 TFAP2C JASPAR yes 27748286
chr1 28488520 28488532 TFAP2A JASPAR yes 118262294
chr1 28488520 28488532 TFAP2B JASPAR yes 118262295
chr1 28488520 28488532 TFAP2C JASPAR yes 118262296
chr1 28488520 28488535 TFAP2A JASPAR yes 27748287
chr1 28488520 28488535 TFAP2C JASPAR yes 27748288
chr1 28488520 28488535 TFAP2A JASPAR yes 118262297
chr1 28488520 28488535 TFAP2C JASPAR yes 118262298
chr1 28488521 28488530 TFAP2A JASPAR yes 27748289
chr1 28488521 28488530 TFAP2A JASPAR yes 118262299
chr1 28488526 28488547 ZNF263 JASPAR yes 27748290
chr1 28488526 28488547 ZNF263 JASPAR yes 118262300
chr1 28488530 28488551 ZNF263 JASPAR yes 27748291
chr1 28488530 28488551 ZNF263 JASPAR yes 118262301
chr1 28488535 28488541 HiNF-A TRANSFAC yes 27748292
chr1 28488535 28488541 HiNF-A TRANSFAC yes 118262302
chr1 28488541 28488546 ETS2 TRANSFAC yes 27748293
chr1 28488541 28488546 ETS2 TRANSFAC yes 118262303
chr1 28488565 28488575 ID4 JASPAR yes 27748294
chr1 28488565 28488575 ID4 JASPAR yes 118262304
chr1 28488567 28488572 USF2 TRANSFAC yes 27748295
chr1 28488567 28488572 USF2 TRANSFAC yes 118262305
SNP sites on vista991[chr1:28488264-28488580]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 28488408 rs139806952 G A
IRF1
190511
chr1 28488459 rs541152253 C A no 190512
Genes possibly regulated by vista991[chr1:28488264-28488580]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 28296855 28415207 - EYA3 ENSG00000158161.11 28415207 0.83 0.99 404 26943
chr1 28473677 28520447 - PTAFR ENSG00000169403.7 28520447 0.84 1.0 405 68133
chr1 28525967 28559536 - DNAJC8 ENSG00000126698.6 28559536 0.64 0.99 406 29044
chr1 28527013 28527152 - AL353354.1 ENSG00000215902.1 28527152 0.0 0.0 407 61428
chr1 28527070 28527419 + AL353354.2 ENSG00000269804.1 28527070 0.98 1.0 408 61510
chr1 28562620 28573417 + ATPIF1 ENSG00000130770.13 28562620 0.9 0.99 409 25960
chr1 28586038 28609002 + SESN2 ENSG00000130766.4 28586038 0.78 1.0 410 2542
Expression level of Genes
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miRNAs possibly regulated by vista991[chr1:28488264-28488580]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results