EnhancerDB
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  3. vista996[chr1:28573636-28574084]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista996[chr1:28573636-28574084]
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Tissue distribution of vista996
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Transcription factor that possibly regulate vista996[chr1:28573636-28574084]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 28573615 28573636 ZNF263 JASPAR yes 27753642
chr1 28573615 28573636 ZNF263 JASPAR yes 118262630
chr1 28573616 28573637 IRF1 JASPAR yes 27753643
chr1 28573616 28573637 IRF1 JASPAR yes 118262631
chr1 28573617 28573638 IRF1 JASPAR yes 27753644
chr1 28573617 28573638 ZNF263 JASPAR yes 27753645
chr1 28573617 28573638 IRF1 JASPAR yes 118262632
chr1 28573617 28573638 ZNF263 JASPAR yes 118262633
chr1 28573618 28573639 ZNF263 JASPAR yes 27753646
chr1 28573618 28573639 ZNF263 JASPAR yes 118262634
chr1 28573620 28573641 ZNF263 JASPAR yes 27753647
chr1 28573620 28573641 ZNF263 JASPAR yes 118262635
chr1 28573621 28573636 PRDM1 JASPAR yes 27753648
chr1 28573621 28573636 PRDM1 JASPAR yes 118262636
chr1 28573623 28573644 ZNF263 JASPAR yes 27753649
chr1 28573623 28573644 ZNF263 JASPAR yes 118262637
chr1 28573626 28573647 ZNF263 JASPAR yes 27753651
chr1 28573626 28573647 ZNF263 JASPAR yes 118262638
chr1 28573628 28573649 ZNF263 JASPAR yes 27753652
chr1 28573628 28573649 ZNF263 JASPAR yes 118262639
chr1 28573633 28573654 ZNF263 JASPAR yes 27753653
chr1 28573633 28573654 ZNF263 JASPAR yes 118262640
chr1 28573634 28573655 IRF1 JASPAR yes 27753654
chr1 28573634 28573655 ZNF263 JASPAR yes 27753655
chr1 28573634 28573655 IRF1 JASPAR yes 118262641
chr1 28573634 28573655 ZNF263 JASPAR yes 118262642
chr1 28573638 28573652 SPIC JASPAR yes 27753656
chr1 28573638 28573652 STAT1 JASPAR yes 27753657
chr1 28573638 28573652 SPIC JASPAR yes 118262643
chr1 28573638 28573652 STAT1 JASPAR yes 118262644
chr1 28573638 28573653 PRDM1 JASPAR yes 27753658
chr1 28573638 28573653 STAT2 JASPAR yes 27753659
chr1 28573638 28573653 PRDM1 JASPAR yes 118262645
chr1 28573638 28573653 STAT2 JASPAR yes 118262646
chr1 28573638 28573659 IRF1 JASPAR yes 27753660
chr1 28573638 28573659 IRF1 JASPAR yes 118262647
chr1 28573640 28573661 IRF1 JASPAR yes 27753661
chr1 28573640 28573661 IRF1 JASPAR yes 118262648
chr1 28573642 28573663 IRF1 JASPAR yes 27753662
chr1 28573642 28573663 ZNF263 JASPAR yes 27753663
chr1 28573642 28573663 IRF1 JASPAR yes 118262649
chr1 28573642 28573663 ZNF263 JASPAR yes 118262650
chr1 28573646 28573667 IRF1 JASPAR yes 27753664
chr1 28573646 28573667 ZNF263 JASPAR yes 27753665
chr1 28573646 28573667 IRF1 JASPAR yes 118262651
chr1 28573646 28573667 ZNF263 JASPAR yes 118262652
chr1 28573650 28573671 IRF1 JASPAR yes 27753666
chr1 28573650 28573671 IRF1 JASPAR yes 118262653
chr1 28573654 28573675 IRF1 JASPAR yes 27753667
chr1 28573654 28573675 IRF1 JASPAR yes 118262654
chr1 28573660 28573681 IRF1 JASPAR yes 27753668
chr1 28573660 28573681 IRF1 JASPAR yes 118262655
chr1 28573682 28573686 LFA1 TRANSFAC yes 27753669
chr1 28573682 28573686 LFA1 TRANSFAC yes 118262656
chr1 28573710 28573720 SMAD3 JASPAR yes 27753670
chr1 28573710 28573720 SMAD3 JASPAR yes 118262657
chr1 28573727 28573732 SP1 TRANSFAC yes 27753671
chr1 28573727 28573732 SP1 TRANSFAC yes 118262658
chr1 28573742 28573757 NFYB JASPAR yes 27753672
chr1 28573742 28573757 NFYB JASPAR yes 118262659
chr1 28573744 28573760 NFYA JASPAR yes 27753673
chr1 28573744 28573760 NFYA JASPAR yes 118262660
chr1 28573745 28573763 NFYA JASPAR yes 27753674
chr1 28573745 28573763 NFYA JASPAR yes 118262661
chr1 28573749 28573753 H1TF2 TRANSFAC yes 27753675
chr1 28573749 28573753 NFE TRANSFAC yes 27753676
chr1 28573749 28573753 SRF TRANSFAC yes 27753677
chr1 28573749 28573753 H1TF2 TRANSFAC yes 118262662
chr1 28573749 28573753 NFE TRANSFAC yes 118262663
chr1 28573749 28573753 SRF TRANSFAC yes 118262664
chr1 28573756 28573773 PAX1 JASPAR yes 27753678
chr1 28573756 28573773 PAX1 JASPAR yes 118262665
chr1 28573760 28573775 RFX5 JASPAR yes 27753679
chr1 28573760 28573775 RFX5 JASPAR yes 118262666
chr1 28573772 28573790 ESR1 JASPAR yes 27753680
chr1 28573772 28573790 ESR1 JASPAR yes 118262667
chr1 28573800 28573818 ESR1 JASPAR yes 27753681
chr1 28573800 28573818 ESR1 JASPAR yes 118262668
chr1 28573808 28573823 TFAP2A JASPAR yes 27753682
chr1 28573808 28573823 TFAP2A JASPAR yes 118262669
chr1 28573812 28573821 TFAP2A JASPAR yes 27753683
chr1 28573812 28573821 TFAP2A JASPAR yes 118262670
chr1 28573826 28573832 ETS1 JASPAR yes 27753684
chr1 28573826 28573832 ETS1 JASPAR yes 118262671
chr1 28573844 28573864 TP63 JASPAR yes 27753685
chr1 28573844 28573864 TP63 JASPAR yes 118262672
chr1 28573845 28573863 TP53 JASPAR yes 27753686
chr1 28573845 28573863 TP53 JASPAR yes 118262673
chr1 28573858 28573862 NFE TRANSFAC yes 27753687
chr1 28573858 28573862 NFE TRANSFAC yes 118262674
chr1 28573859 28573864 GATA2 JASPAR yes 27753688
chr1 28573859 28573864 GATA2 JASPAR yes 118262675
chr1 28573879 28573895 NFYA JASPAR yes 27753689
chr1 28573879 28573895 NFYA JASPAR yes 118262676
chr1 28573889 28573899 NFIA JASPAR yes 27753690
chr1 28573889 28573899 NFIA JASPAR yes 118262677
chr1 28573891 28573897 NFIC JASPAR yes 27753691
chr1 28573891 28573897 NFIC JASPAR yes 118262678
chr1 28573900 28573908 SP1 TRANSFAC yes 27753692
chr1 28573900 28573908 SP1 TRANSFAC yes 118262679
chr1 28573900 28573910 SP1 JASPAR yes 27753693
chr1 28573900 28573910 SP1 JASPAR yes 118262680
chr1 28573901 28573907 SP1 TRANSFAC yes 27753694
chr1 28573901 28573907 SP1 TRANSFAC yes 118262681
chr1 28573901 28573911 SP1 JASPAR yes 27753695
chr1 28573901 28573911 SP1 JASPAR yes 118262682
chr1 28573903 28573908 SP1 TRANSFAC yes 27753696
chr1 28573903 28573908 SP1 TRANSFAC yes 118262683
chr1 28573912 28573930 NFYA JASPAR yes 27753697
chr1 28573912 28573930 NFYA JASPAR yes 118262684
chr1 28573915 28573931 NFYA JASPAR yes 27753698
chr1 28573915 28573931 NFYA JASPAR yes 118262685
chr1 28573918 28573933 NFYB JASPAR yes 27753699
chr1 28573918 28573933 NFYB JASPAR yes 118262686
chr1 28573928 28573938 RUNX3 JASPAR yes 27753700
chr1 28573928 28573938 RUNX3 JASPAR yes 118262687
chr1 28573929 28573938 RUNX2 JASPAR yes 27753701
chr1 28573929 28573938 RUNX2 JASPAR yes 118262688
chr1 28573934 28573946 DBP JASPAR yes 27753702
chr1 28573934 28573946 HLF JASPAR yes 27753703
chr1 28573934 28573946 DBP JASPAR yes 118262689
chr1 28573934 28573946 HLF JASPAR yes 118262690
chr1 28573936 28573944 GMEB2 JASPAR yes 27753704
chr1 28573936 28573944 GMEB2 JASPAR yes 118262691
chr1 28573936 28573947 NFIL3 JASPAR yes 27753705
chr1 28573936 28573947 NFIL3 JASPAR yes 118262692
chr1 28573945 28573960 SCRT1 JASPAR yes 27753706
chr1 28573945 28573960 SCRT1 JASPAR yes 118262693
chr1 28573947 28573960 SCRT2 JASPAR yes 27753707
chr1 28573947 28573960 SCRT2 JASPAR yes 118262694
chr1 28573950 28573965 RFX5 JASPAR yes 27753708
chr1 28573950 28573965 RFX5 JASPAR yes 118262695
chr1 28573994 28574006 MYBL1 JASPAR yes 27753709
chr1 28573994 28574006 MYBL1 JASPAR yes 118262696
chr1 28573999 28574002 MYB TRANSFAC yes 27753710
chr1 28573999 28574002 MYB TRANSFAC yes 118262697
chr1 28574007 28574016 RUNX2 JASPAR yes 27753711
chr1 28574007 28574016 RUNX2 JASPAR yes 118262698
chr1 28574007 28574017 RUNX3 JASPAR yes 27753712
chr1 28574007 28574017 RUNX3 JASPAR yes 118262699
chr1 28574021 28574033 INSM1 JASPAR yes 27753713
chr1 28574021 28574033 INSM1 JASPAR yes 118262700
chr1 28574024 28574037 NR2F1 JASPAR yes 27753714
chr1 28574024 28574037 NR2F1 JASPAR yes 118262701
chr1 28574028 28574032 ESR1 TRANSFAC yes 27753715
chr1 28574028 28574032 ESR1 TRANSFAC yes 118262702
chr1 28574029 28574044 FOXP1 JASPAR yes 27753716
chr1 28574029 28574044 FOXP1 JASPAR yes 118262703
chr1 28574032 28574046 ONECUT2 JASPAR yes 27753717
chr1 28574032 28574046 ONECUT3 JASPAR yes 27753718
chr1 28574032 28574046 ONECUT2 JASPAR yes 118262704
chr1 28574032 28574046 ONECUT3 JASPAR yes 118262705
chr1 28574034 28574043 SRY JASPAR yes 27753719
chr1 28574034 28574043 SRY JASPAR yes 118262706
chr1 28574056 28574071 IRF9 JASPAR yes 27753720
chr1 28574056 28574071 IRF9 JASPAR yes 118262707
chr1 28574080 28574098 E2F3 JASPAR yes 27753721
chr1 28574080 28574098 E2F3 JASPAR yes 118262708
SNP sites on vista996[chr1:28573636-28574084]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 28573642 rs543674656 A AAAAG
IRF1 PRDM1 SPIC STAT1 STAT2 ZNF263
191091
chr1 28573642 rs6691903 A G
IRF1 PRDM1 SPIC STAT1 STAT2 ZNF263
191092
chr1 28573650 rs141490693 G GA,GAAAGAAAGAAAGAAAGA
IRF1 PRDM1 SPIC STAT1 STAT2 ZNF263
191093
chr1 28573659 rs528863790 A G
IRF1 ZNF263
191094
chr1 28573707 rs113355350 A AG no 191095
chr1 28573707 rs554522114 A AG no 191096
chr1 28573835 rs492554 C T no 191097
chr1 28573850 rs146691264 A C
TP53 TP63
191098
chr1 28573860 rs112112426 T G
GATA2 NFE TP53 TP63
191099
chr1 28574043 rs515437 T A
FOXP1 ONECUT2 ONECUT3 SRY
191100
Genes possibly regulated by vista996[chr1:28573636-28574084]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 28473677 28520447 - PTAFR ENSG00000169403.7 28520447 0.84 1.0 405 46811
chr1 28525967 28559536 - DNAJC8 ENSG00000126698.6 28559536 0.64 0.99 406 85900
chr1 28527013 28527152 - AL353354.1 ENSG00000215902.1 28527152 0.0 0.0 407 53516
chr1 28527070 28527419 + AL353354.2 ENSG00000269804.1 28527070 0.98 1.0 408 53434
chr1 28562620 28573417 + ATPIF1 ENSG00000130770.13 28562620 0.9 0.99 409 88984
chr1 28586038 28609002 + SESN2 ENSG00000130766.4 28586038 0.78 1.0 410 88046
chr1 28655513 28662476 + MED18 ENSG00000130772.9 28655513 0.61 1.0 411 18571
Expression level of Genes
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miRNAs possibly regulated by vista996[chr1:28573636-28574084]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results