EnhancerDB
  1. Home
  2. Enhancers
  3. vista997[chr1:28576012-28576248]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista997[chr1:28576012-28576248]
Back to top
Tissue distribution of vista997
Back to top
Transcription factor that possibly regulate vista997[chr1:28576012-28576248]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 28576009 28576013 YY1 TRANSFAC yes 27753960
chr1 28576009 28576013 YY1 TRANSFAC yes 118262709
chr1 28576034 28576039 GATA1 TRANSFAC yes 27753961
chr1 28576034 28576039 GATA1 TRANSFAC yes 118262710
chr1 28576061 28576076 MEF2C JASPAR yes 27753962
chr1 28576061 28576076 MEF2C JASPAR yes 118262711
chr1 28576062 28576077 MEF2A JASPAR yes 27753963
chr1 28576062 28576077 MEF2A JASPAR yes 118262712
chr1 28576063 28576074 FOXB1 JASPAR yes 27753964
chr1 28576063 28576074 FOXC1 JASPAR yes 27753965
chr1 28576063 28576074 FOXB1 JASPAR yes 118262713
chr1 28576063 28576074 FOXC1 JASPAR yes 118262714
chr1 28576063 28576075 MEF2A JASPAR yes 27753966
chr1 28576063 28576075 MEF2B JASPAR yes 27753967
chr1 28576063 28576075 MEF2D JASPAR yes 27753968
chr1 28576063 28576075 MEF2A JASPAR yes 118262715
chr1 28576063 28576075 MEF2B JASPAR yes 118262716
chr1 28576063 28576075 MEF2D JASPAR yes 118262717
chr1 28576064 28576074 MEF2A JASPAR yes 27753969
chr1 28576064 28576074 MEF2A JASPAR yes 118262718
chr1 28576064 28576076 FOXI1 JASPAR yes 27753970
chr1 28576064 28576076 FOXI1 JASPAR yes 118262719
chr1 28576065 28576069 TEAD2 TRANSFAC yes 27753971
chr1 28576065 28576069 TEAD2 TRANSFAC yes 118262720
chr1 28576065 28576070 TBP TRANSFAC yes 27753972
chr1 28576065 28576070 TBP TRANSFAC yes 118262721
chr1 28576065 28576071 TMF TRANSFAC yes 27753973
chr1 28576065 28576071 TMF TRANSFAC yes 118262722
chr1 28576071 28576086 NFYB JASPAR yes 27753974
chr1 28576071 28576086 NFYB JASPAR yes 118262723
chr1 28576073 28576089 NFYA JASPAR yes 27753975
chr1 28576073 28576089 NFYA JASPAR yes 118262724
chr1 28576074 28576092 NFYA JASPAR yes 27753976
chr1 28576074 28576092 NFYA JASPAR yes 118262725
chr1 28576078 28576082 H1TF2 TRANSFAC yes 27753977
chr1 28576078 28576082 NFE TRANSFAC yes 27753978
chr1 28576078 28576082 SRF TRANSFAC yes 27753979
chr1 28576078 28576082 H1TF2 TRANSFAC yes 118262726
chr1 28576078 28576082 NFE TRANSFAC yes 118262727
chr1 28576078 28576082 SRF TRANSFAC yes 118262728
chr1 28576098 28576111 ATF4 JASPAR yes 27753980
chr1 28576098 28576111 ATF4 JASPAR yes 118262729
chr1 28576131 28576151 PPARG JASPAR yes 27753981
chr1 28576131 28576151 PPARG JASPAR yes 118262730
chr1 28576148 28576163 MEF2C JASPAR yes 27753982
chr1 28576148 28576163 MEF2C JASPAR yes 118262731
chr1 28576149 28576164 MEF2A JASPAR yes 27753983
chr1 28576149 28576164 MEF2A JASPAR yes 118262732
chr1 28576150 28576162 MEF2B JASPAR yes 27753984
chr1 28576150 28576162 MEF2D JASPAR yes 27753985
chr1 28576150 28576162 MEF2B JASPAR yes 118262733
chr1 28576150 28576162 MEF2D JASPAR yes 118262734
chr1 28576161 28576182 ZNF263 JASPAR yes 27753986
chr1 28576161 28576182 ZNF263 JASPAR yes 118262735
chr1 28576167 28576177 ZNF740 JASPAR yes 27753987
chr1 28576167 28576177 ZNF740 JASPAR yes 118262736
chr1 28576168 28576173 TFAP2A TRANSFAC yes 27753988
chr1 28576168 28576173 TFAP2A TRANSFAC yes 118262737
chr1 28576168 28576174 MZF1 JASPAR yes 27753989
chr1 28576168 28576174 MZF1 JASPAR yes 118262738
chr1 28576168 28576178 SP1 JASPAR yes 27753990
chr1 28576168 28576178 SP1 JASPAR yes 118262739
chr1 28576169 28576178 SP1 TRANSFAC yes 27753991
chr1 28576169 28576178 SP1 TRANSFAC yes 118262740
chr1 28576170 28576176 MAZ TRANSFAC yes 27753992
chr1 28576170 28576176 MAZ TRANSFAC yes 118262741
chr1 28576175 28576187 TEAD1 JASPAR yes 27753993
chr1 28576175 28576187 TEAD1 JASPAR yes 118262742
chr1 28576176 28576182 PEA3 TRANSFAC yes 27753994
chr1 28576176 28576182 PEA3 TRANSFAC yes 118262743
chr1 28576177 28576187 TEAD1 JASPAR yes 27753995
chr1 28576177 28576187 TEAD4 JASPAR yes 27753996
chr1 28576177 28576187 TEAD1 JASPAR yes 118262744
chr1 28576177 28576187 TEAD4 JASPAR yes 118262745
chr1 28576178 28576186 TEAD3 JASPAR yes 27753997
chr1 28576178 28576186 TEAD3 JASPAR yes 118262746
chr1 28576184 28576193 HIC2 JASPAR yes 27753998
chr1 28576184 28576193 HIC2 JASPAR yes 118262747
chr1 28576190 28576210 ESR1 JASPAR yes 27753999
chr1 28576190 28576210 ESR1 JASPAR yes 118262748
chr1 28576193 28576211 ESR2 JASPAR yes 27754000
chr1 28576193 28576211 ESR2 JASPAR yes 118262749
chr1 28576194 28576211 ESR1 JASPAR yes 27754001
chr1 28576194 28576211 ESR1 JASPAR yes 118262750
chr1 28576195 28576209 TLX1 JASPAR yes 27754002
chr1 28576195 28576209 TLX1 JASPAR yes 118262751
chr1 28576196 28576210 TLX1 JASPAR yes 27754003
chr1 28576196 28576210 TLX1 JASPAR yes 118262752
chr1 28576205 28576224 PAX5 JASPAR yes 27754004
chr1 28576205 28576224 PAX5 JASPAR yes 118262753
chr1 28576236 28576246 RELA JASPAR yes 27754005
chr1 28576236 28576246 RELA JASPAR yes 118262754
chr1 28576237 28576247 RELA JASPAR yes 27754006
chr1 28576237 28576247 RELA JASPAR yes 118262755
chr1 28576237 28576248 NFKB1 JASPAR yes 27754007
chr1 28576237 28576248 NFKB1 JASPAR yes 118262756
chr1 28576239 28576244 H4TF1 TRANSFAC yes 27754008
chr1 28576239 28576244 H4TF1 TRANSFAC yes 118262757
chr1 28576241 28576252 STAT1 JASPAR yes 27754009
chr1 28576241 28576252 STAT1 JASPAR yes 118262758
chr1 28576244 28576265 REST JASPAR yes 27754010
chr1 28576244 28576265 REST JASPAR yes 118262759
chr1 28576245 28576264 REST JASPAR yes 27754011
chr1 28576245 28576264 REST JASPAR yes 118262760
SNP sites on vista997[chr1:28576012-28576248]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 28576128 rs146525885 CAGA C no 191129
Genes possibly regulated by vista997[chr1:28576012-28576248]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 28473677 28520447 - PTAFR ENSG00000169403.7 28520447 0.84 1.0 405 44435
chr1 28525967 28559536 - DNAJC8 ENSG00000126698.6 28559536 0.64 0.99 406 83524
chr1 28527013 28527152 - AL353354.1 ENSG00000215902.1 28527152 0.0 0.0 407 51140
chr1 28527070 28527419 + AL353354.2 ENSG00000269804.1 28527070 0.98 1.0 408 51058
chr1 28562620 28573417 + ATPIF1 ENSG00000130770.13 28562620 0.9 0.99 409 86608
chr1 28586038 28609002 + SESN2 ENSG00000130766.4 28586038 0.78 1.0 410 90210
chr1 28655513 28662476 + MED18 ENSG00000130772.9 28655513 0.61 1.0 411 20735
Expression level of Genes
Back to top
miRNAs possibly regulated by vista997[chr1:28576012-28576248]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results