EnhancerDB
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  3. vista999[chr1:28640564-28640739]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista999[chr1:28640564-28640739]
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Tissue distribution of vista999
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Transcription factor that possibly regulate vista999[chr1:28640564-28640739]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 28640554 28640569 AR JASPAR yes 27759447
chr1 28640554 28640569 AR JASPAR yes 118262790
chr1 28640565 28640575 NFIA JASPAR yes 27759448
chr1 28640565 28640575 NFIA JASPAR yes 118262791
chr1 28640566 28640575 NFIX JASPAR yes 27759449
chr1 28640566 28640575 NFIX JASPAR yes 118262792
chr1 28640567 28640573 NFIC JASPAR yes 27759450
chr1 28640567 28640573 NFIC JASPAR yes 118262793
chr1 28640593 28640608 SOX21 JASPAR yes 27759451
chr1 28640593 28640608 SOX21 JASPAR yes 118262794
chr1 28640608 28640623 AR JASPAR yes 27759452
chr1 28640608 28640623 AR JASPAR yes 118262795
chr1 28640630 28640648 NFYA JASPAR yes 27759453
chr1 28640630 28640648 NFYA JASPAR yes 118262796
chr1 28640632 28640644 FOXI1 JASPAR yes 27759454
chr1 28640632 28640644 FOXI1 JASPAR yes 118262797
chr1 28640658 28640677 PAX5 JASPAR yes 27759455
chr1 28640658 28640677 PAX5 JASPAR yes 118262798
chr1 28640680 28640691 BATF JASPAR yes 27759456
chr1 28640680 28640691 BATF JASPAR yes 118262799
chr1 28640681 28640692 JUNB JASPAR yes 27759457
chr1 28640681 28640692 NFE2L2 JASPAR yes 27759458
chr1 28640681 28640692 JUNB JASPAR yes 118262800
chr1 28640681 28640692 NFE2L2 JASPAR yes 118262801
chr1 28640682 28640693 FOS JASPAR yes 27759459
chr1 28640682 28640693 FOSL1 JASPAR yes 27759460
chr1 28640682 28640693 JUND JASPAR yes 27759461
chr1 28640682 28640693 FOS JASPAR yes 118262802
chr1 28640682 28640693 FOSL1 JASPAR yes 118262803
chr1 28640682 28640693 JUND JASPAR yes 118262804
chr1 28640683 28640694 FOSL2 JASPAR yes 27759462
chr1 28640683 28640694 JUNB JASPAR yes 27759463
chr1 28640683 28640694 FOSL2 JASPAR yes 118262805
chr1 28640683 28640694 JUNB JASPAR yes 118262806
chr1 28640683 28640697 JUN JASPAR yes 27759464
chr1 28640683 28640697 JUN JASPAR yes 118262807
chr1 28640691 28640696 SP1 TRANSFAC yes 27759465
chr1 28640691 28640696 SP1 TRANSFAC yes 118262808
chr1 28640702 28640713 CEBPB JASPAR yes 27759466
chr1 28640702 28640713 CEBPB JASPAR yes 118262809
chr1 28640703 28640714 CEBPA JASPAR yes 27759467
chr1 28640703 28640714 CEBPA JASPAR yes 118262810
chr1 28640704 28640715 TBX20 JASPAR yes 27759468
chr1 28640704 28640715 TBX20 JASPAR yes 118262811
chr1 28640717 28640721 NFE TRANSFAC yes 27759469
chr1 28640717 28640721 NFE TRANSFAC yes 118262812
chr1 28640721 28640737 ZNF143 JASPAR yes 27759470
chr1 28640721 28640737 ZNF143 JASPAR yes 118262813
chr1 28640730 28640751 ZNF263 JASPAR yes 27759471
chr1 28640730 28640751 ZNF263 JASPAR yes 118262814
SNP sites on vista999[chr1:28640564-28640739]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 28640578 rs146955958 C T no 191615
chr1 28640676 rs74541415 C T
PAX5
191616
chr1 28640698 rs546582711 A G no 191617
Genes possibly regulated by vista999[chr1:28640564-28640739]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 28525967 28559536 - DNAJC8 ENSG00000126698.6 28559536 0.64 0.99 406 18972
chr1 28562620 28573417 + ATPIF1 ENSG00000130770.13 28562620 0.9 0.99 409 22056
chr1 28586038 28609002 + SESN2 ENSG00000130766.4 28586038 0.78 1.0 410 45474
chr1 28655513 28662476 + MED18 ENSG00000130772.9 28655513 0.61 1.0 411 85226
chr1 28696114 28826881 + PHACTR4 ENSG00000204138.8 28696114 0.81 1.0 412 44625
Expression level of Genes
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miRNAs possibly regulated by vista999[chr1:28640564-28640739]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results