EnhancerDB
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  3. rs10489340[chr1:209798068]
Enhancers that have rs10489340[chr1:209798068]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 209790185 209800779 enh50168
Brain (SK-N-SH) Brain (SK-N-MC) Large Intestine Esophagus Muscle (A673) Heart
chr1 209798058 209798744 vista4910
VISTA
Transcript factors that have rs10489340[chr1:209798068]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 209797514 209798671 ZNF274 GTRD no Bone Marrow (K562) 107865892
chr1 209797651 209798741 ZBTB33 GTRD no Lung (A549) 107865893
chr1 209797739 209798415 ZNF274 GTRD no Bone Marrow (K562) 107865894
chr1 209797767 209798632 ZNF274 GTRD no Bone Marrow (K562) 107865895
chr1 209797778 209798456 ZNF274 GTRD no Bone Marrow (K562) 107865896
chr1 209797778 209798743 ZNF143 GTRD no Epithelial (MCF-7) 107865897
chr1 209797781 209798666 ZNF143 GTRD no Epithelial (MCF-7) 107865898
chr1 209797787 209798647 ZNF274 GTRD no Cervix (HeLa-S3) 107865899
chr1 209797796 209798536 ZNF274 GTRD no Bone Marrow (K562) 107865900
chr1 209797812 209798598 ZBTB33 GTRD no Lung (A549) 107865901
chr1 209797840 209798266 ZNF274 GTRD no Bone Marrow (K562) 107865902
chr1 209797877 209798537 ZNF274 GTRD no Bone Marrow (K562) 107865903
chr1 209797879 209798578 ZBTB33 GTRD no Lung (A549) 107865904
chr1 209797888 209798497 ZNF274 GTRD no Bone Marrow (K562) 107865905
chr1 209797888 209798698 ZNF274 GTRD no Blood (GM12878) 107865906
chr1 209797894 209798530 ZNF143 GTRD no Epithelial (MCF-7) 107865907
chr1 209797894 209798692 ZNF274 GTRD no Blood (GM12878) 107865908
chr1 209797914 209798457 ZNF274 GTRD no Liver (HepG2) 107865909
chr1 209797918 209798531 ZNF274 GTRD no Bone Marrow (K562) 107865910
chr1 209797936 209798499 ZNF274 GTRD no Blood (GM12878) 107865911
chr1 209797951 209798500 ZNF274 GTRD no Bone Marrow (K562) 107865912
chr1 209797962 209798253 ZNF274 GTRD no Bone Marrow (K562) 107865913
chr1 209797964 209798287 ZNF274 GTRD no Blood (GM12878) 107865914
chr1 209797965 209798226 ZNF274 GTRD no Bone Marrow (K562) 107865915
chr1 209797971 209798521 ZBTB33 GTRD no Lung (A549) 107865916
chr1 209797975 209798419 ZBTB33 GTRD no Lung (A549) 107865917
chr1 209797982 209798447 ZNF274 GTRD no Bone Marrow (K562) 107865918
chr1 209798002 209798432 ZNF274 GTRD no Bone Marrow (K562) 107865919
chr1 209798004 209798460 ZNF274 GTRD no Bone Marrow (K562) 107865920
chr1 209798014 209798482 ZNF143 GTRD no Epithelial (MCF-7) 107865921
chr1 209798027 209798363 POL24H8 ENCODE Uniform TFBS no Brain (SK-N-MC) 21375515
chr1 209798027 209798363 POL24H8 ENCODE Uniform TFBS no Brain (SK-N-MC) 107865922
chr1 209798027 209798387 ZNF274 GTRD no Cervix (HeLa-S3) 107865923
chr1 209798030 209798452 ZNF274 GTRD no Liver (HepG2) 107865924
chr1 209798050 209798432 ZNF274 GTRD no Cervix (HeLa-S3) 107865925
chr1 209798060 209798072 TGIF1 JASPAR yes 34985940
chr1 209798060 209798072 TGIF2 JASPAR yes 34985941
chr1 209798060 209798072 TGIF1 JASPAR yes 118448641
chr1 209798060 209798072 TGIF2 JASPAR yes 118448642
chr1 209798063 209798461 ZNF274 GTRD no Liver (HepG2) 107865926
chr1 209798065 209798071 ATF1 TRANSFAC yes 34985942
chr1 209798065 209798071 ATF1 TRANSFAC yes 118448643
Genes associated with rs10489340[chr1:209798068], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More