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- rs10644440[chr12:55005542]
Enhancers that have rs10644440[chr12:55005542]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr12 |
54993685 |
55007915 |
enh14749 |
|
|
Transcript factors that have rs10644440[chr12:55005542]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr12
|
55005535
|
55005554
|
CTCF
|
JASPAR
|
yes
|
|
121047476
|
|
|
chr12
|
55005536
|
55005551
|
ZIC3
|
JASPAR
|
yes
|
|
121047477
|
|
|
chr12
|
55005536
|
55005551
|
ZIC4
|
JASPAR
|
yes
|
|
121047478
|
|
|
chr12
|
55005537
|
55005551
|
GLIS2
|
JASPAR
|
yes
|
|
121047479
|
|
|
chr12
|
55005537
|
55005551
|
GLIS3
|
JASPAR
|
yes
|
|
121047480
|
|
|
chr12
|
55005537
|
55005551
|
ZIC1
|
JASPAR
|
yes
|
|
121047481
|
|
Genes associated with rs10644440[chr12:55005542], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |
|
chr12
|
55341802
|
55378530
|
-
|
TESPA1
|
ENSG00000135426.10
|
55378530
|
336260
|
Lung
|
0.00201396
|
12159
|
|
|
chr12
|
54685895
|
54694905
|
-
|
NFE2
|
ENSG00000123405.9
|
54694905
|
310637
|
Stomach
|
0.21154
|
12147
|
|