EnhancerDB
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  3. rs11164972[chr1:94212124]
Enhancers that have rs11164972[chr1:94212124]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 94194189 94212355 enh12058
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Placenta Colon (HCT116) Thyroid Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Heart
Transcript factors that have rs11164972[chr1:94212124]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 94212114 94212129 TFAP2A JASPAR yes 30831049
chr1 94212117 94212129 TFAP2A JASPAR yes 30831050
chr1 94212117 94212129 TFAP2B JASPAR yes 30831051
chr1 94212117 94212129 TFAP2C JASPAR yes 30831052
chr1 94212124 94212128 LFA1 TRANSFAC yes 30831053
Genes associated with rs11164972[chr1:94212124], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 93297582 93307481 + RPL5 ENSG00000122406.8 93297582 904643 Esophagus 0.213063 900