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- rs112368534[chr16:1173047]
Enhancers that have rs112368534[chr16:1173047]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr16 |
1171945 |
1177784 |
enh52190 |
|
|
Transcript factors that have rs112368534[chr16:1173047]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr16
|
1168691
|
1173659
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
21684241
|
|
|
chr16
|
1171353
|
1175840
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
21684242
|
|
|
chr16
|
1171353
|
1175840
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108171163
|
|
|
chr16
|
1171570
|
1173388
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
21684243
|
|
|
chr16
|
1171580
|
1173520
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
21684245
|
|
|
chr16
|
1172090
|
1173498
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
21684247
|
|
|
chr16
|
1173038
|
1173049
|
NFKB1
|
JASPAR
|
yes
|
|
9137178
|
|
|
chr16
|
1173038
|
1173051
|
NFKB2
|
JASPAR
|
yes
|
|
9137179
|
|
|
chr16
|
1173039
|
1173052
|
NFKB2
|
JASPAR
|
yes
|
|
9137180
|
|
Genes associated with rs112368534[chr16:1173047], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |
|
chr16
|
691813
|
698474
|
+
|
FAM195A
|
ENSG00000172366.15
|
691813
|
474573
|
Esophagus
|
0.274849
|
14355
|
|
|
chr16
|
1203241
|
1271771
|
+
|
CACNA1H
|
ENSG00000196557.6
|
1203241
|
30194
|
Lung
|
0.227582
|
14379
|
|