EnhancerDB
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  3. rs112396680[chr17:47975467]
Enhancers that have rs112396680[chr17:47975467]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 47955625 47981555 enh17209
Prostate (PC-3) Liver (HepG2) Large Intestine Prostate (RWPE1) Esophagus Ovary Placenta Thyroid Lung (PC-9) Pancreas Epithelial (MCF-7)
Transcript factors that have rs112396680[chr17:47975467]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 47974848 47976203 ZNF143 GTRD no Epithelial (MCF-7) 21769176
chr17 47974915 47975955 ZNF143 GTRD no Epithelial (MCF-7) 21769177
chr17 47974933 47976055 ZNF143 GTRD no Epithelial (MCF-7) 21769178
chr17 47974951 47976206 ZNF143 GTRD no Epithelial (MCF-7) 21769179
chr17 47974964 47976163 ZNF143 GTRD no Epithelial (MCF-7) 21769180
chr17 47975174 47976284 ZNF143 GTRD no Epithelial (MCF-7) 21769181
chr17 47975202 47976143 ZNF143 GTRD no Epithelial (MCF-7) 21769182
chr17 47975457 47975471 PLAG1 JASPAR yes 54667102
chr17 47975458 47975475 RARA JASPAR yes 54667103
chr17 47975459 47975472 TFAP2A JASPAR yes 54667104
chr17 47975459 47975472 TFAP2B JASPAR yes 54667105
chr17 47975459 47975472 TFAP2C JASPAR yes 54667106
Genes associated with rs112396680[chr17:47975467], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More