EnhancerDB
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  3. rs112398259[chr1:185522275]
Enhancers that have rs112398259[chr1:185522275]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 185514745 185522715 enh12477
Thyroid Placenta
Transcript factors that have rs112398259[chr1:185522275]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 185522273 185522283 EMX1 JASPAR yes 33821192
chr1 185522273 185522283 EMX2 JASPAR yes 33821193
chr1 185522273 185522283 GBX2 JASPAR yes 33821194
chr1 185522273 185522283 HOXB2 JASPAR yes 33821195
chr1 185522273 185522283 HOXB3 JASPAR yes 33821196
chr1 185522273 185522283 LHX6 JASPAR yes 33821197
chr1 185522273 185522283 MEOX1 JASPAR yes 33821198
chr1 185522273 185522283 MEOX2 JASPAR yes 33821199
chr1 185522273 185522283 MNX1 JASPAR yes 33821200
chr1 185522273 185522283 POU6F1 JASPAR yes 33821201
chr1 185522274 185522282 LMX1A JASPAR yes 33821202
chr1 185522274 185522282 LMX1B JASPAR yes 33821203
chr1 185522274 185522282 NKX6-1 JASPAR yes 33821204
chr1 185522274 185522282 NKX6-2 JASPAR yes 33821205
chr1 185522274 185522282 PDX1 JASPAR yes 33821206
chr1 185522274 185522282 VAX1 JASPAR yes 33821207
chr1 185522274 185522282 VAX2 JASPAR yes 33821208
chr1 185522274 185522282 VSX1 JASPAR yes 33821209
chr1 185522274 185522287 DUXA JASPAR yes 33821210
chr1 185522275 185522286 DUX4 JASPAR yes 33821211
chr1 185522275 185522286 PHOX2A JASPAR yes 33821212
chr1 185522275 185522286 PROP1 JASPAR yes 33821213
Genes associated with rs112398259[chr1:185522275], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More