EnhancerDB
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  3. rs112506401[chr1:38529096]
Enhancers that have rs112506401[chr1:38529096]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 38522945 38541879 enh26636
Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Muscle (A673) Embryonic Stem Cell Line (H1-hESC)
Transcript factors that have rs112506401[chr1:38529096]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 38529077 38529096 PITX2 TRANSFAC yes 28193553
chr1 38529095 38529105 ALX3 JASPAR yes 28193554
chr1 38529095 38529105 EN2 JASPAR yes 28193555
chr1 38529095 38529105 ESX1 JASPAR yes 28193556
chr1 38529095 38529105 GBX1 JASPAR yes 28193557
chr1 38529095 38529105 LBX2 JASPAR yes 28193558
chr1 38529095 38529105 LHX2 JASPAR yes 28193559
chr1 38529095 38529105 MIXL1 JASPAR yes 28193560
chr1 38529096 38529104 LHX9 JASPAR yes 28193561
chr1 38529096 38529104 SHOX JASPAR yes 28193562
Genes associated with rs112506401[chr1:38529096], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More