EnhancerDB
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  3. rs112566652[chr1:229798260]
Enhancers that have rs112566652[chr1:229798260]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 229794965 229802416 enh43169
Brain (SK-N-SH) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Blood (GM12878) Muscle (A673) Spleen Muscle (Myotube) Blood (T-cell)
Transcript factors that have rs112566652[chr1:229798260]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 229798247 229798262 STAT2 JASPAR yes 35994995
chr1 229798249 229798270 IRF1 JASPAR yes 35994996
chr1 229798250 229798265 FOXP1 JASPAR yes 35994997
chr1 229798251 229798266 FOXP1 JASPAR yes 35994998
chr1 229798252 229798267 FOXP1 JASPAR yes 35994999
chr1 229798253 229798267 IRF7 JASPAR yes 35995000
chr1 229798255 229798276 IRF1 JASPAR yes 35995001
chr1 229798257 229798272 STAT2 JASPAR yes 35995002
chr1 229798258 229798272 STAT1 JASPAR yes 35995003
chr1 229798259 229798271 IRF1 JASPAR yes 35995004
chr1 229798259 229798273 IRF7 JASPAR yes 35995005
chr1 229798259 229798273 IRF8 JASPAR yes 35995006
chr1 229798259 229798274 IRF9 JASPAR yes 35995007
chr1 229798260 229798278 IRF2 JASPAR yes 35995008
Genes associated with rs112566652[chr1:229798260], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More