EnhancerDB
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  3. rs11260601[chr1:1004048]
Enhancers that have rs11260601[chr1:1004048]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 992241 1006235 enh11407
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Placenta Colon (HCT116) Pancreas Thymus
Transcript factors that have rs11260601[chr1:1004048]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 1002785 1007204 TCF7L2 GTRD no Colon (HCT116) 107801768
chr1 1002785 1007204 TCF7L2 GTRD no Colon (HCT116) 107801769
chr1 1004039 1004050 ELK4 JASPAR yes 26179304
chr1 1004040 1004050 GABPA JASPAR yes 26179305
chr1 1004040 1004052 ELF1 JASPAR yes 26179306
chr1 1004040 1004052 ELF4 JASPAR yes 26179307
chr1 1004041 1004050 ELK4 JASPAR yes 26179308
chr1 1004042 1004048 ETS1 JASPAR yes 26179309
chr1 1004042 1004048 SPI1 JASPAR yes 26179310
chr1 1004042 1004052 ELK1 JASPAR yes 26179311
Genes associated with rs11260601[chr1:1004048], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More