EnhancerDB
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Enhancers that have rs113584554[chr17:39109850]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 39099743 39114455 enh17146
Prostate (PC-3) Liver (HepG2) Brain (SK-N-MC) Large Intestine Ovary Esophagus Placenta Colon (HCT116) Lung (PC-9)
Transcript factors that have rs113584554[chr17:39109850]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 39108802 39110107 TCF7L2 GTRD no Colon (HCT116) 21757343
chr17 39108802 39110107 TCF7L2 GTRD no Colon (HCT116) 108258044
chr17 39109171 39109948 TCF7L2 GTRD no Colon (HCT116) 21757346
chr17 39109171 39109948 TCF7L2 GTRD no Colon (HCT116) 108258052
chr17 39109507 39110028 TCF7L2 GTRD no Colon (HCT116) 21757347
chr17 39109832 39109853 IRF1 JASPAR yes 54247493
chr17 39109838 39109859 IRF1 JASPAR yes 54247494
chr17 39109840 39109855 STAT2 JASPAR yes 54247496
chr17 39109841 39109855 STAT1 JASPAR yes 54247497
chr17 39109842 39109857 IRF9 JASPAR yes 54247498
chr17 39109845 39109860 FOXP1 JASPAR yes 54247499
chr17 39109846 39109857 FOXP2 JASPAR yes 54247500
chr17 39109846 39109866 RREB1 JASPAR yes 54247501
chr17 39109847 39109862 FOXP1 JASPAR yes 54247502
chr17 39109847 39109867 RREB1 JASPAR yes 54247503
chr17 39109850 39109870 RREB1 JASPAR yes 54247504
Genes associated with rs113584554[chr17:39109850], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More