EnhancerDB
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  3. rs115339964[chr1:992558]
Enhancers that have rs115339964[chr1:992558]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 992241 1006235 enh11407
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Placenta Colon (HCT116) Pancreas Thymus
Transcript factors that have rs115339964[chr1:992558]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 991777 993545 ZNF274 GTRD no Blood (GM12878) 107801766
chr1 992555 992563 TBX5 JASPAR yes 26177220
chr1 992555 992564 ZEB1 JASPAR yes 26177221
chr1 992555 992570 SCRT1 JASPAR yes 26177222
chr1 992556 992566 FIGLA JASPAR yes 26177223
chr1 992556 992566 ID4 JASPAR yes 26177224
chr1 992556 992566 TCF3 JASPAR yes 26177225
chr1 992556 992566 TCF4 JASPAR yes 26177226
chr1 992557 992566 SNAI2 JASPAR yes 26177227
chr1 992557 992570 SCRT2 JASPAR yes 26177228
chr1 992558 992563 USF2 TRANSFAC yes 26177229
Genes associated with rs115339964[chr1:992558], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More