EnhancerDB
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  3. rs116186396[chr1:53758222]
Enhancers that have rs116186396[chr1:53758222]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 53755300 53765134 enh42963
Bone Marrow (K562) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Blood (T-cell) Bone (Osteoblast) Blood (OCI-LY7) Colon (HCT116) Thyroid Peripheral Blood (MM.1S) Muscle (Myoblast) Muscle (Myotube) Thymus Epithelial (MCF-7)
Transcript factors that have rs116186396[chr1:53758222]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 53758216 53758226 ID4 JASPAR yes 28921075
chr1 53758216 53758226 TCF3 JASPAR yes 28921076
chr1 53758216 53758226 TCF4 JASPAR yes 28921077
chr1 53758216 53758230 EBF1 JASPAR yes 28921078
chr1 53758218 53758223 USF2 TRANSFAC yes 28921079
chr1 53758222 53758227 TFAP2A TRANSFAC yes 28921080
chr1 53758222 53758228 MZF1 JASPAR yes 28921081
chr1 53758222 53758235 NFKB1 JASPAR yes 28921082
chr1 53758222 53758235 NFKB2 JASPAR yes 28921083
Genes associated with rs116186396[chr1:53758222], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More