EnhancerDB
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Enhancers that have rs116194603[chr1:17499092]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 17485905 17499477 enh11553
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Astrocyte Placenta Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Epithelial (MCF-7)
Transcript factors that have rs116194603[chr1:17499092]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 17499084 17499097 ZBTB18 JASPAR yes 27074684
chr1 17499086 17499095 SNAI2 JASPAR yes 27074685
chr1 17499086 17499096 FIGLA JASPAR yes 27074686
chr1 17499086 17499096 ID4 JASPAR yes 27074687
chr1 17499086 17499096 TCF3 JASPAR yes 27074688
chr1 17499086 17499096 TCF4 JASPAR yes 27074689
chr1 17499088 17499097 ZEB1 JASPAR yes 27074690
chr1 17499088 17499098 TBX21 JASPAR yes 27074691
chr1 17499089 17499097 MGA JASPAR yes 27074692
chr1 17499089 17499097 TBX15 JASPAR yes 27074693
chr1 17499089 17499097 TBX1 JASPAR yes 27074694
chr1 17499089 17499097 TBX4 JASPAR yes 27074695
chr1 17499089 17499097 TBX5 JASPAR yes 27074696
chr1 17499089 17499099 TBR1 JASPAR yes 27074697
chr1 17499089 17499102 SMAD2 JASPAR yes 27074698
Genes associated with rs116194603[chr1:17499092], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More