EnhancerDB
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  3. rs116377297[chr6:37523575]
Enhancers that have rs116377297[chr6:37523575]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 37512005 37533256 enh9092
Prostate (PC-3) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas (Panc1) Thymus
chr6 37523438 37523883 vista51823
VISTA
Transcript factors that have rs116377297[chr6:37523575]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 37521208 37524171 POLR2A UCSC Txn Factor no Conserved 108540106
chr6 37521208 37524171 POLR2A UCSC Txn Factor no Conserved 108540107
chr6 37521208 37524171 POLR2A UCSC Txn Factor no Conserved 108540108
chr6 37523566 37523580 PLAG1 JASPAR yes 70358828
chr6 37523566 37523580 PLAG1 JASPAR yes 101418940
chr6 37523574 37523587 NFKB1 JASPAR yes 70358829
chr6 37523574 37523587 NFKB1 JASPAR yes 101418941
chr6 37523575 37523585 NFKB1 JASPAR yes 70358830
chr6 37523575 37523585 NFKB1 JASPAR yes 101418942
chr6 37523575 37523586 NFKB1 JASPAR yes 70358831
chr6 37523575 37523586 NFKB1 JASPAR yes 101418943
Genes associated with rs116377297[chr6:37523575], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More