EnhancerDB
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  3. rs116552053[chr1:40653847]
Enhancers that have rs116552053[chr1:40653847]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 40643885 40654534 enh270
Bone Marrow (K562) Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Muscle (A673) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Blood (T-cell)
Transcript factors that have rs116552053[chr1:40653847]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 40653836 40653851 FOXP1 JASPAR yes 28320448
chr1 40653837 40653848 FOXA1 JASPAR yes 28320449
chr1 40653839 40653850 FOXP2 JASPAR yes 28320450
Genes associated with rs116552053[chr1:40653847], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More