EnhancerDB
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  3. rs116639490[chr1:53755424]
Enhancers that have rs116639490[chr1:53755424]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 53755300 53765134 enh42963
Bone Marrow (K562) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Blood (T-cell) Bone (Osteoblast) Blood (OCI-LY7) Colon (HCT116) Thyroid Peripheral Blood (MM.1S) Muscle (Myoblast) Muscle (Myotube) Thymus Epithelial (MCF-7)
Transcript factors that have rs116639490[chr1:53755424]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 53755419 53755434 AR JASPAR yes 28920752
chr1 53755420 53755431 ELF5 JASPAR yes 28920753
chr1 53755420 53755431 SPDEF JASPAR yes 28920754
chr1 53755422 53755429 PEA3 TRANSFAC yes 28920755
Genes associated with rs116639490[chr1:53755424], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More