EnhancerDB
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Enhancers that have rs116990655[chr17:80188728]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 80186825 80193555 enh107730
Blood (T-cell)
Transcript factors that have rs116990655[chr17:80188728]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 80185948 80191522 POLR2A UCSC Txn Factor no Conserved 108311237
chr17 80188298 80188862 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108311238
chr17 80188311 80188821 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108311239
chr17 80188311 80189079 E2F6 UCSC Txn Factor no Conserved 108311240
chr17 80188314 80188858 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108311241
chr17 80188344 80188800 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108311242
chr17 80188346 80188876 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108311243
chr17 80188367 80188883 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108311244
chr17 80188367 80189101 TFAP2C UCSC Txn Factor no Conserved 108311245
chr17 80188396 80188860 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108311246
chr17 80188466 80188816 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108311247
chr17 80188506 80189057 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108311248
chr17 80188511 80188895 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108311249
chr17 80188513 80189023 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108311250
chr17 80188521 80189119 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108311251
chr17 80188525 80188961 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108311252
chr17 80188585 80189101 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108311253
chr17 80188591 80188907 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108311254
chr17 80188610 80188926 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108311255
chr17 80188632 80189262 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108311256
chr17 80188664 80189104 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 108311257
chr17 80188669 80190041 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108311258
chr17 80188674 80189085 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108311259
chr17 80188674 80189099 MAX UCSC Txn Factor no Conserved 108311260
chr17 80188675 80189115 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108311261
chr17 80188676 80189140 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108311262
chr17 80188677 80189077 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108311263
chr17 80188678 80189118 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108311264
chr17 80188681 80189117 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108311265
chr17 80188681 80189151 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 108311266
chr17 80188683 80189139 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108311267
chr17 80188690 80189146 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108311268
chr17 80188700 80189196 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108311269
chr17 80188703 80189039 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108311270
chr17 80188704 80189044 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108311271
chr17 80188707 80188906 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108311272
chr17 80188714 80189059 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108311273
chr17 80188727 80188738 NRF1 JASPAR yes 56353448
chr17 80188728 80188732 LFA1 TRANSFAC yes 56353449
Genes associated with rs116990655[chr17:80188728], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr17 80015382 80023763 - DUS1L ENSG00000169718.13 80023763 164965 Ovary 0.0910357 16385