-
Home
- SNP
- rs117257570[chr17:8391686]
Enhancers that have rs117257570[chr17:8391686]
Back to top
| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr17 |
8391640 |
8392024 |
vista23908 |
|
|
Transcript factors that have rs117257570[chr17:8391686]
Back to top
| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr17
|
8391122
|
8392763
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108237469
|
|
|
chr17
|
8391344
|
8391993
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108237470
|
|
|
chr17
|
8391437
|
8392225
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108237471
|
|
|
chr17
|
8391476
|
8392093
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108237472
|
|
|
chr17
|
8391478
|
8391820
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108237473
|
|
|
chr17
|
8391490
|
8392186
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108237474
|
|
|
chr17
|
8391519
|
8392177
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108237475
|
|
|
chr17
|
8391556
|
8392190
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108237476
|
|
|
chr17
|
8391585
|
8392083
|
MYOD
|
GTRD
|
no
|
Muscle (Myoblast)
|
108237477
|
|
|
chr17
|
8391594
|
8392191
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108237478
|
|
|
chr17
|
8391601
|
8392140
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108237479
|
|
|
chr17
|
8391604
|
8391927
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108237480
|
|
|
chr17
|
8391606
|
8392262
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108237481
|
|
|
chr17
|
8391613
|
8392155
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108237482
|
|
|
chr17
|
8391617
|
8392278
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108237483
|
|
|
chr17
|
8391619
|
8392063
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108237484
|
|
|
chr17
|
8391627
|
8392145
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108237485
|
|
|
chr17
|
8391633
|
8392065
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108237486
|
|
|
chr17
|
8391633
|
8392267
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108237487
|
|
|
chr17
|
8391634
|
8392050
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108237488
|
|
|
chr17
|
8391637
|
8392258
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108237489
|
|
|
chr17
|
8391655
|
8392234
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108237490
|
|
|
chr17
|
8391665
|
8392200
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108237491
|
|
|
chr17
|
8391678
|
8391691
|
SCRT2
|
JASPAR
|
yes
|
|
21194349
|
|
|
chr17
|
8391681
|
8393286
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108237492
|
|
|
chr17
|
8391681
|
8393638
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108237493
|
|
Genes associated with rs117257570[chr17:8391686], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |