EnhancerDB
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  3. rs117724996[chr17:80183602]
Enhancers that have rs117724996[chr17:80183602]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 80183373 80183743 vista26449
VISTA
Transcript factors that have rs117724996[chr17:80183602]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 80183235 80183691 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108311217
chr17 80183282 80183682 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108311218
chr17 80183329 80183749 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108311219
chr17 80183381 80183697 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108311221
chr17 80183466 80184683 TCF7L2 GTRD no Colon (HCT116) 108311222
chr17 80183473 80184144 ZNF274 GTRD no Blood (GM12878) 108311223
chr17 80183525 80184927 TCF7L2 GTRD no Colon (HCT116) 108311224
chr17 80183525 80184927 TCF7L2 GTRD no Colon (HCT116) 108311225
chr17 80183528 80184719 TCF7L2 GTRD no Colon (HCT116) 108311226
chr17 80183540 80184373 TCF7L2 GTRD no Colon (HCT116) 108311227
chr17 80183553 80184162 TCF7L2 GTRD no Colon (HCT116) 108311228
chr17 80183569 80184655 ZNF143 GTRD no Epithelial (MCF-7) 108311229
chr17 80183579 80184652 TCF7L2 GTRD no Colon (HCT116) 108311230
chr17 80183581 80184687 ZNF143 GTRD no Epithelial (MCF-7) 108311231
chr17 80183592 80183609 RARA JASPAR yes 21321260
chr17 80183596 80183614 ESR2 JASPAR yes 21321262
chr17 80183597 80183612 ESR2 JASPAR yes 21321263
chr17 80183597 80183617 ESR1 JASPAR yes 21321264
Genes associated with rs117724996[chr17:80183602], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More