EnhancerDB
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  3. rs117890556[chr1:204677782]
Enhancers that have rs117890556[chr1:204677782]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 204671389 204688135 enh890
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Blood (OCI-LY7) Placenta Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Thymus Epithelial (MCF-7)
Transcript factors that have rs117890556[chr1:204677782]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 204677091 204679415 ZNF143 GTRD no Epithelial (MCF-7) 21370968
chr1 204677491 204678195 ZNF274 GTRD no Bone Marrow (K562) 21370969
chr1 204677519 204678167 ZNF143 GTRD no Epithelial (MCF-7) 21370970
chr1 204677537 204678112 ZNF143 GTRD no Epithelial (MCF-7) 21370971
chr1 204677543 204677833 ZNF274 GTRD no Bone Marrow (K562) 21370972
chr1 204677548 204678078 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21370973
chr1 204677556 204678072 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21370974
chr1 204677610 204677950 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21370975
chr1 204677613 204677933 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21370976
chr1 204677668 204677932 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21370977
chr1 204677673 204678131 ZNF274 GTRD no Bone Marrow (K562) 21370978
chr1 204677688 204677944 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21370979
chr1 204677691 204678111 ZNF143 GTRD no Epithelial (MCF-7) 21370980
chr1 204677771 204677787 SOX4 JASPAR yes 34722124
chr1 204677771 204678208 ZNF274 GTRD no Bone Marrow (K562) 21370981
chr1 204677780 204677791 FOS JASPAR yes 34722125
chr1 204677781 204677790 JDP2 JASPAR yes 34722126
chr1 204677782 204678606 ZNF274 GTRD no Bone Marrow (K562) 21370982
Genes associated with rs117890556[chr1:204677782], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More