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- rs11962520[chr6:43188600]
Enhancers that have rs11962520[chr6:43188600]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr6 |
43187125 |
43195855 |
enh108066 |
|
|
Transcript factors that have rs11962520[chr6:43188600]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr6
|
43188589
|
43188609
|
PPARG
|
JASPAR
|
yes
|
|
101759437
|
|
|
chr6
|
43188591
|
43188603
|
ZBTB7A
|
JASPAR
|
yes
|
|
101759438
|
|
|
chr6
|
43188595
|
43188605
|
FIGLA
|
JASPAR
|
yes
|
|
101759439
|
|
|
chr6
|
43188595
|
43188605
|
MSC
|
JASPAR
|
yes
|
|
101759440
|
|
|
chr6
|
43188595
|
43188605
|
TCF3
|
JASPAR
|
yes
|
|
101759441
|
|
|
chr6
|
43188596
|
43188605
|
SNAI2
|
JASPAR
|
yes
|
|
101759442
|
|
|
chr6
|
43188597
|
43188602
|
USF2
|
TRANSFAC
|
yes
|
|
101759443
|
|
Genes associated with rs11962520[chr6:43188600], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |
|
chr6
|
42712219
|
42714558
|
-
|
TBCC
|
ENSG00000124659.5
|
42714558
|
474042
|
Breast
|
0.331383
|
6590
|
|