EnhancerDB
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  3. rs12040376[chr1:180102759]
Enhancers that have rs12040376[chr1:180102759]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 180090529 180108295 enh12420
Prostate (PC-3) Liver (HepG2) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Placenta Lung (PC-9) Epithelial (MCF-7)
Transcript factors that have rs12040376[chr1:180102759]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 180102747 180102764 RXRA JASPAR yes 33502614
chr1 180102759 180102769 SP1 JASPAR yes 33502615
Genes associated with rs12040376[chr1:180102759], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More