EnhancerDB
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  3. rs12041181[chr1:41000346]
Enhancers that have rs12041181[chr1:41000346]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 40999505 41003655 enh92044
Liver (HepG2)
Transcript factors that have rs12041181[chr1:41000346]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 41000336 41000352 NFYA JASPAR yes 28329813
chr1 41000338 41000348 EN2 JASPAR yes 28329814
chr1 41000338 41000348 ESX1 JASPAR yes 28329815
chr1 41000338 41000348 GBX1 JASPAR yes 28329816
chr1 41000338 41000348 GBX2 JASPAR yes 28329817
chr1 41000338 41000348 GSX2 JASPAR yes 28329818
chr1 41000338 41000348 HESX1 JASPAR yes 28329819
chr1 41000338 41000348 LBX2 JASPAR yes 28329820
chr1 41000338 41000348 LHX2 JASPAR yes 28329821
chr1 41000338 41000348 MIXL1 JASPAR yes 28329822
chr1 41000338 41000348 RAX JASPAR yes 28329823
chr1 41000339 41000347 BARX1 JASPAR yes 28329824
chr1 41000339 41000347 BSX JASPAR yes 28329825
chr1 41000339 41000347 EN1 JASPAR yes 28329826
chr1 41000339 41000347 ISX JASPAR yes 28329827
chr1 41000339 41000347 LHX9 JASPAR yes 28329828
chr1 41000339 41000347 MSX1 JASPAR yes 28329829
chr1 41000339 41000347 MSX2 JASPAR yes 28329830
chr1 41000339 41000347 PRRX1 JASPAR yes 28329831
chr1 41000339 41000347 RAX2 JASPAR yes 28329832
chr1 41000339 41000347 SHOX JASPAR yes 28329833
chr1 41000339 41000354 NFYB JASPAR yes 28329834
chr1 41000344 41000359 MEF2A JASPAR yes 28329835
chr1 41000345 41000360 MEF2C JASPAR yes 28329836
Genes associated with rs12041181[chr1:41000346], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More