EnhancerDB
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  3. rs12077618[chr1:28842340]
Enhancers that have rs12077618[chr1:28842340]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 28831005 28856175 enh187
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Prostate (RWPE1) Esophagus Blood (OCI-LY7) Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas Epithelial (MCF-7)
Transcript factors that have rs12077618[chr1:28842340]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 28842334 28842345 USF1 JASPAR yes 27774691
chr1 28842334 28842345 USF2 JASPAR yes 27774692
chr1 28842335 28842342 USF2 TRANSFAC yes 27774693
chr1 28842335 28842345 SREBF2 JASPAR yes 27774694
chr1 28842337 28842342 USF2 TRANSFAC yes 27774695
Genes associated with rs12077618[chr1:28842340], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More