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- rs12086422[chr1:179160254]
Enhancers that have rs12086422[chr1:179160254]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr1 |
179158138 |
179165288 |
enh775 |
|
|
| chr1 |
179160106 |
179160405 |
vista4053 |
|
|
Transcript factors that have rs12086422[chr1:179160254]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr1
|
179159788
|
179160354
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
107847549
|
|
|
chr1
|
179160001
|
179160277
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
107847552
|
|
|
chr1
|
179160248
|
179160266
|
NR3C1
|
JASPAR
|
yes
|
|
33474288
|
|
|
chr1
|
179160248
|
179160266
|
NR3C1
|
JASPAR
|
yes
|
|
118406176
|
|
|
chr1
|
179160252
|
179160257
|
ATF1
|
TRANSFAC
|
yes
|
|
33474289
|
|
|
chr1
|
179160252
|
179160257
|
ATF1
|
TRANSFAC
|
yes
|
|
118406177
|
|
Genes associated with rs12086422[chr1:179160254], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |