EnhancerDB
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  3. rs12088088[chr1:213083629]
Enhancers that have rs12088088[chr1:213083629]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 213083359 213083697 vista5035
VISTA
Transcript factors that have rs12088088[chr1:213083629]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 213083294 213083670 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107869382
chr1 213083307 213083797 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107869383
chr1 213083562 213083918 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107869384
chr1 213083622 213083932 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107869385
chr1 213083625 213083646 IRF1 JASPAR yes 118455540
chr1 213083627 213083642 PRDM1 JASPAR yes 118455541
Genes associated with rs12088088[chr1:213083629], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More