EnhancerDB
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  3. rs12143070[chr1:236102320]
Enhancers that have rs12143070[chr1:236102320]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 236091945 236120510 enh12806
Skin (Keratinocyte) Prostate (PC-3) Brain (SK-N-MC) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Blood (GM12878) Placenta Muscle (Myoblast) Breast Pancreas (Panc1) Muscle (Myotube) Uterus Thymus Stomach
chr1 236101998 236102489 vista5729
VISTA
Transcript factors that have rs12143070[chr1:236102320]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 236100874 236102457 ZNF274 GTRD no Blood (GM12878) 21404010
chr1 236100874 236102457 ZNF274 GTRD no Blood (GM12878) 107886270
chr1 236100936 236102337 ZNF274 GTRD no Blood (GM12878) 21404011
chr1 236100936 236102337 ZNF274 GTRD no Blood (GM12878) 107886271
chr1 236100954 236102397 ZNF274 GTRD no Blood (GM12878) 21404012
chr1 236100954 236102397 ZNF274 GTRD no Blood (GM12878) 107886272
chr1 236101739 236102346 ZNF274 GTRD no Blood (GM12878) 21404024
chr1 236101739 236102346 ZNF274 GTRD no Blood (GM12878) 107886288
chr1 236101895 236102491 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21404025
chr1 236101895 236102491 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107886290
chr1 236101896 236102370 ZNF274 GTRD no Blood (GM12878) 21404026
chr1 236101896 236102370 ZNF274 GTRD no Blood (GM12878) 107886291
chr1 236101965 236102349 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21404027
chr1 236101965 236102349 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107886292
chr1 236102056 236102346 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21404028
chr1 236102056 236102346 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107886293
chr1 236102314 236102320 LEF1 TRANSFAC yes 36390487
chr1 236102314 236102320 SOX10 JASPAR yes 36390488
chr1 236102314 236102320 LEF1 TRANSFAC yes 118489982
chr1 236102314 236102320 SOX10 JASPAR yes 118489983
chr1 236102320 236102325 GATA2 JASPAR yes 36390489
chr1 236102320 236102325 GATA2 JASPAR yes 118489984
Genes associated with rs12143070[chr1:236102320], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More