EnhancerDB
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  3. rs12190215[chr6:42731993]
Enhancers that have rs12190215[chr6:42731993]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 42728265 42744755 enh9126
Prostate (PC-3) Large Intestine Prostate (RWPE1) Blood (T-cell) Astrocyte Blood (OCI-LY7) Blood (GM12878) Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas Thymus
Transcript factors that have rs12190215[chr6:42731993]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 42731978 42731993 FOXP1 JASPAR yes 101739269
chr6 42731979 42731994 FOXP1 JASPAR yes 101739270
chr6 42731981 42731996 FOXP1 JASPAR yes 101739271
chr6 42731982 42731997 STAT2 JASPAR yes 101739272
chr6 42731983 42731998 FOXP1 JASPAR yes 101739273
chr6 42731983 42732004 IRF1 JASPAR yes 101739274
chr6 42731985 42731997 FOXC2 JASPAR yes 101739275
chr6 42731986 42731997 FOXP2 JASPAR yes 101739276
chr6 42731986 42732000 IRF7 JASPAR yes 101739277
chr6 42731986 42732000 ONECUT3 JASPAR yes 101739278
chr6 42731988 42732000 IRF1 JASPAR yes 101739279
Genes associated with rs12190215[chr6:42731993], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More