EnhancerDB
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  3. rs12190220[chr6:42732022]
Enhancers that have rs12190220[chr6:42732022]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 42728265 42744755 enh9126
Prostate (PC-3) Large Intestine Prostate (RWPE1) Blood (T-cell) Astrocyte Blood (OCI-LY7) Blood (GM12878) Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas Thymus
Transcript factors that have rs12190220[chr6:42732022]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 42732003 42732023 PPARG JASPAR yes 101739281
chr6 42732005 42732022 ESR1 JASPAR yes 101739282
chr6 42732019 42732027 TBX5 JASPAR yes 101739284
chr6 42732019 42732028 ZEB1 JASPAR yes 101739285
chr6 42732019 42732032 ZBTB18 JASPAR yes 101739286
chr6 42732020 42732030 FIGLA JASPAR yes 101739287
chr6 42732020 42732030 ID4 JASPAR yes 101739288
chr6 42732020 42732030 TCF3 JASPAR yes 101739289
chr6 42732020 42732030 TCF4 JASPAR yes 101739290
chr6 42732021 42732030 SNAI2 JASPAR yes 101739291
chr6 42732022 42732027 USF2 TRANSFAC yes 101739292
Genes associated with rs12190220[chr6:42732022], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More