EnhancerDB
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  3. rs12257709[chr10:25177233]
Enhancers that have rs12257709[chr10:25177233]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr10 25169345 25193458 enh13071
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs12257709[chr10:25177233]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr10 25172473 25177280 ZNF274 GTRD no Bone Marrow (K562) 21422373
chr10 25172473 25177280 ZNF274 GTRD no Bone Marrow (K562) 107904402
chr10 25177227 25177244 RARA JASPAR yes 126101150
chr10 25177229 25177239 SP1 JASPAR yes 126101151
Genes associated with rs12257709[chr10:25177233], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More