Enhancers that have rs12307701[chr12:54090724]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 54088125 54092335 enh87961
chr12 54090636 54091341 vista335

Transcript factors that have rs12307701[chr12:54090724]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 54090198 54090814 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107686657
chr12 54090198 54090814 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108036518
chr12 54090254 54090807 TCF7L2 GTRD no Colon (HCT116) 108036519
chr12 54090267 54090890 TCF7L2 GTRD no Colon (HCT116) 108036521
chr12 54090331 54090739 ZNF143 GTRD no Epithelial (MCF-7) 21549478
chr12 54090331 54090739 ZNF143 GTRD no Epithelial (MCF-7) 108036522
chr12 54090345 54090755 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108036523
chr12 54090462 54090846 TCF7L2 GTRD no Colon (HCT116) 108036526
chr12 54090712 54090733 ZNF263 JASPAR yes 56414480
chr12 54090712 54090733 ZNF263 JASPAR yes 121002179
chr12 54090715 54090736 ZNF263 JASPAR yes 56414481
chr12 54090715 54090736 ZNF263 JASPAR yes 121002180
chr12 54090724 54090745 ZNF263 JASPAR yes 56414482
chr12 54090724 54090745 ZNF263 JASPAR yes 121002181

Genes associated with rs12307701[chr12:54090724], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More