EnhancerDB
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  3. rs12319789[chr12:54090450]
Enhancers that have rs12319789[chr12:54090450]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 54088125 54092335 enh87961
Pancreas Epithelial (MCF-7)
chr12 54090300 54090537 vista13538
VISTA
Transcript factors that have rs12319789[chr12:54090450]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 54090121 54090611 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108036512
chr12 54090135 54090599 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108036513
chr12 54090160 54090536 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108036514
chr12 54090169 54090579 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108036515
chr12 54090198 54090814 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107686657
chr12 54090198 54090814 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108036518
chr12 54090254 54090807 TCF7L2 GTRD no Colon (HCT116) 108036519
chr12 54090257 54090450 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108036520
chr12 54090267 54090890 TCF7L2 GTRD no Colon (HCT116) 108036521
chr12 54090331 54090739 ZNF143 GTRD no Epithelial (MCF-7) 21549478
chr12 54090331 54090739 ZNF143 GTRD no Epithelial (MCF-7) 108036522
chr12 54090345 54090755 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108036523
chr12 54090377 54090712 TCF7L2 GTRD no Colon (HCT116) 108036524
Genes associated with rs12319789[chr12:54090450], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More