EnhancerDB
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  3. rs12409707[chr1:49340980]
Enhancers that have rs12409707[chr1:49340980]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 49340005 49346470 enh26682
Prostate (PC-3) Cervix (HeLa-S3) Esophagus Astrocyte Lung (A549) Muscle (A673) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Epithelial (MCF-7)
Transcript factors that have rs12409707[chr1:49340980]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 49340978 49340993 TFAP2C JASPAR yes 28754770
chr1 49340980 49340992 TFAP2A JASPAR yes 28754771
chr1 49340980 49340992 TFAP2B JASPAR yes 28754772
chr1 49340980 49340992 TFAP2C JASPAR yes 28754773
chr1 49340980 49340993 TFAP2A JASPAR yes 28754774
chr1 49340980 49340993 TFAP2B JASPAR yes 28754775
chr1 49340980 49340993 TFAP2C JASPAR yes 28754776
chr1 49340980 49340995 TFAP2A JASPAR yes 28754777
Genes associated with rs12409707[chr1:49340980], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More